Analysis of interatomic Contacts of Structural Units in PDB entry:
6IO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IO1 entry

There are 2 chains in PDB entry 6IO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3ASP 451
B
 GLU 4ASP 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6IO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
25 33Right-handed alpha
Helix 3
AA3
A
57 62Right-handed alpha
Helix 4
AA4
A
69 83Right-handed alpha
Helix 5
AA5
A
88 90Right-handed 310
Helix 6
AA6
A
94 108Right-handed alpha
Helix 7
AA7
A
120 139Right-handed alpha
Helix 8
AA8
A
167 171Right-handed 310
Helix 9
AA9
A
188 193Right-handed alpha
Helix 10
AB1
A
197 217Right-handed alpha
Helix 11
AB2
A
241 254Right-handed alpha
Helix 12
AB3
A
273 279Right-handed alpha
Helix 13
AB4
A
290 292Right-handed 310
Helix 14
AB5
A
305 313Right-handed alpha
Helix 15
AB6
A
327 345Right-handed alpha
Helix 16
AB7
A
345 362Right-handed alpha
Helix 17
AB8
A
363 367Right-handed 310
Helix 18
AB9
A
395 398Right-handed 310
Helix 19
AC1
A
399 411Right-handed alpha
Helix 20
AC2
A
431 451Right-handed alpha
Helix 21
AC3
B
7 19Right-handed alpha
Helix 22
AC4
B
25 33Right-handed alpha
Helix 23
AC5
B
57 62Right-handed alpha
Helix 24
AC6
B
69 83Right-handed alpha
Helix 25
AC7
B
88 90Right-handed 310
Helix 26
AC8
B
94 108Right-handed alpha
Helix 27
AC9
B
120 139Right-handed alpha
Helix 28
AD1
B
158 165Right-handed alpha
Helix 29
AD2
B
167 172Right-handed alpha
Helix 30
AD3
B
188 193Right-handed alpha
Helix 31
AD4
B
197 217Right-handed alpha
Helix 32
AD5
B
241 254Right-handed alpha
Helix 33
AD6
B
273 279Right-handed alpha
Helix 34
AD7
B
288 292Right-handed 310
Helix 35
AD8
B
305 313Right-handed alpha
Helix 36
AD9
B
327 345Right-handed alpha
Helix 37
AE1
B
345 362Right-handed alpha
Helix 38
AE2
B
363 367Right-handed 310
Helix 39
AE3
B
395 398Right-handed 310
Helix 40
AE4
B
399 411Right-handed alpha
Helix 41
AE5
B
431 451Right-handed alpha
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There are 6 sheets in PDB entry 6IO1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 414first strand
Strand 2
A
52 55parallel
Strand 3
A
44 47anti-parallel
Strand 4
A
35 41anti-parallel
Strand 5
B
92 93parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
B
35 41parallel
Strand 3
B
44 47anti-parallel
Strand 4
B
52 55anti-parallel
Strand 5
B
413 414parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 118first strand
Strand 2
A
299 304anti-parallel
Strand 3
A
284 288anti-parallel
Strand 4
A
256 260parallel
Strand 5
A
221 226parallel
Strand 6
A
146 150parallel
Strand 7
A
181 184parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 376first strand
Strand 2
A
379 384anti-parallel
Strand 3
A
421 424anti-parallel
Strand 4
A
416 418anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 118first strand
Strand 2
B
299 304anti-parallel
Strand 3
B
284 287anti-parallel
Strand 4
B
256 260parallel
Strand 5
B
221 226parallel
Strand 6
B
146 150parallel
Strand 7
B
181 184parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
370 376first strand
Strand 2
B
379 384anti-parallel
Strand 3
B
421 424anti-parallel
Strand 4
B
416 418anti-parallel
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