Analysis of interatomic Contacts of Structural Units in PDB entry:
6IOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IOV entry

There are 2 chains in PDB entry 6IOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 65GLU 288
B
 SER 69TYR 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6IOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 102Right-handed alpha
Helix 2
AA2
A
104 113Right-handed alpha
Helix 3
AA3
A
114 121Right-handed alpha
Helix 4
AA4
A
148 151Right-handed 310
Helix 5
AA5
A
152 162Right-handed alpha
Helix 6
AA6
A
203 213Right-handed alpha
Helix 7
AA7
A
236 240Right-handed 310
Helix 8
AA8
A
244 249Right-handed alpha
Helix 9
AA9
B
70 102Right-handed alpha
Helix 10
AB1
B
104 113Right-handed alpha
Helix 11
AB2
B
114 121Right-handed alpha
Helix 12
AB3
B
148 151Right-handed 310
Helix 13
AB4
B
152 162Right-handed alpha
Helix 14
AB5
B
203 212Right-handed alpha
Helix 15
AB6
B
236 240Right-handed 310
Helix 16
AB7
B
244 249Right-handed alpha
Helix 17
AB8
B
287 291Right-handed alpha
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There are 6 sheets in PDB entry 6IOV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
124 128anti-parallel
Strand 3
A
194 202anti-parallel
Strand 4
A
178 187anti-parallel
Strand 5
A
165 166anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
124 128anti-parallel
Strand 3
A
194 202anti-parallel
Strand 4
A
178 187anti-parallel
Strand 5
A
170 171anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 233first strand
Strand 2
A
220 226anti-parallel
Strand 3
A
279 286anti-parallel
Strand 4
A
265 274anti-parallel
Strand 5
A
258 262anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 136first strand
Strand 2
B
124 128anti-parallel
Strand 3
B
194 202anti-parallel
Strand 4
B
178 187anti-parallel
Strand 5
B
165 166anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 136first strand
Strand 2
B
124 128anti-parallel
Strand 3
B
194 202anti-parallel
Strand 4
B
178 187anti-parallel
Strand 5
B
170 171anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 233first strand
Strand 2
B
220 226anti-parallel
Strand 3
B
279 286anti-parallel
Strand 4
B
265 274anti-parallel
Strand 5
B
258 262anti-parallel
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