Analysis of interatomic Contacts of Structural Units in PDB entry:
6IP1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IP1 entry

There are 8 chains in PDB entry 6IP1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 27TRP 89
B
 LEU 192LYS 253
C
 ARG 17LEU 81
D
 ALA 141MET 202
E
 SER 4ARG 295
F
 SER 4ARG 295
G
 SER 4ARG 295
H
 SER 4ARG 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 76 helices in PDB entry 6IP1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 83Right-handed alpha
Helix 2
AA2
B
193 228Right-handed alpha
Helix 3
AA3
B
230 252Right-handed alpha
Helix 4
AA4
C
18 37Right-handed alpha
Helix 5
AA5
C
37 67Right-handed alpha
Helix 6
AA6
C
68 77Right-handed alpha
Helix 7
AA7
C
78 80Right-handed 310
Helix 8
AA8
D
142 201Right-handed alpha
Helix 9
AA9
E
5 20Right-handed alpha
Helix 10
AB1
E
23 27Right-handed 310
Helix 11
AB2
E
39 55Right-handed alpha
Helix 12
AB3
E
57 75Right-handed alpha
Helix 13
AB4
E
77 90Right-handed alpha
Helix 14
AB5
E
91 95Right-handed 310
Helix 15
AB6
E
96 113Right-handed alpha
Helix 16
AB7
E
117 134Right-handed alpha
Helix 17
AB8
E
137 155Right-handed alpha
Helix 18
AB9
E
157 175Right-handed alpha
Helix 19
AC1
E
177 194Right-handed alpha
Helix 20
AC2
E
201 212Right-handed alpha
Helix 21
AC3
E
221 232Right-handed alpha
Helix 22
AC4
E
233 238Right-handed 310
Helix 23
AC5
E
239 252Right-handed alpha
Helix 24
AC6
E
257 268Right-handed alpha
Helix 25
AC7
E
273 295Right-handed alpha
Helix 26
AC8
F
5 20Right-handed alpha
Helix 27
AC9
F
23 27Right-handed 310
Helix 28
AD1
F
39 55Right-handed alpha
Helix 29
AD2
F
57 75Right-handed alpha
Helix 30
AD3
F
77 90Right-handed alpha
Helix 31
AD4
F
91 95Right-handed 310
Helix 32
AD5
F
96 113Right-handed alpha
Helix 33
AD6
F
117 134Right-handed alpha
Helix 34
AD7
F
137 155Right-handed alpha
Helix 35
AD8
F
157 175Right-handed alpha
Helix 36
AD9
F
177 194Right-handed alpha
Helix 37
AE1
F
201 212Right-handed alpha
Helix 38
AE2
F
221 232Right-handed alpha
Helix 39
AE3
F
233 238Right-handed 310
Helix 40
AE4
F
239 252Right-handed alpha
Helix 41
AE5
F
257 268Right-handed alpha
Helix 42
AE6
F
273 295Right-handed alpha
Helix 43
AE7
G
5 20Right-handed alpha
Helix 44
AE8
G
23 27Right-handed 310
Helix 45
AE9
G
39 55Right-handed alpha
Helix 46
AF1
G
57 75Right-handed alpha
Helix 47
AF2
G
81 90Right-handed alpha
Helix 48
AF3
G
91 95Right-handed 310
Helix 49
AF4
G
96 113Right-handed alpha
Helix 50
AF5
G
117 134Right-handed alpha
Helix 51
AF6
G
137 155Right-handed alpha
Helix 52
AF7
G
157 175Right-handed alpha
Helix 53
AF8
G
177 194Right-handed alpha
Helix 54
AF9
G
202 212Right-handed alpha
Helix 55
AG1
G
221 232Right-handed alpha
Helix 56
AG2
G
233 238Right-handed 310
Helix 57
AG3
G
239 252Right-handed alpha
Helix 58
AG4
G
257 268Right-handed alpha
Helix 59
AG5
G
273 295Right-handed alpha
Helix 60
AG6
H
5 20Right-handed alpha
Helix 61
AG7
H
23 27Right-handed 310
Helix 62
AG8
H
39 55Right-handed alpha
Helix 63
AG9
H
57 75Right-handed alpha
Helix 64
AH1
H
77 90Right-handed alpha
Helix 65
AH2
H
91 95Right-handed 310
Helix 66
AH3
H
96 113Right-handed alpha
Helix 67
AH4
H
117 134Right-handed alpha
Helix 68
AH5
H
137 155Right-handed alpha
Helix 69
AH6
H
157 175Right-handed alpha
Helix 70
AH7
H
177 194Right-handed alpha
Helix 71
AH8
H
201 212Right-handed alpha
Helix 72
AH9
H
221 232Right-handed alpha
Helix 73
AI1
H
233 238Right-handed 310
Helix 74
AI2
H
239 252Right-handed alpha
Helix 75
AI3
H
257 268Right-handed alpha
Helix 76
AI4
H
273 295Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6IP1
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il