Analysis of interatomic Contacts of Structural Units in PDB entry:
6IQN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IQN entry

There are 2 chains in PDB entry 6IQN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 501VAL 790
B
 SER 501PRO 788
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6IQN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
506 508Right-handed 310
Helix 2
AA2
A
554 567Right-handed alpha
Helix 3
AA3
A
596 604Right-handed alpha
Helix 4
AA4
A
623 644Right-handed alpha
Helix 5
AA5
A
652 654Right-handed 310
Helix 6
AA6
A
690 694Right-handed 310
Helix 7
AA7
A
695 702Right-handed alpha
Helix 8
AA8
A
705 722Right-handed alpha
Helix 9
AA9
A
732 742Right-handed alpha
Helix 10
AB1
A
753 764Right-handed alpha
Helix 11
AB2
A
767 771Right-handed 310
Helix 12
AB3
A
773 787Right-handed alpha
Helix 13
AB4
B
557 567Right-handed alpha
Helix 14
AB5
B
596 604Right-handed alpha
Helix 15
AB6
B
622 644Right-handed alpha
Helix 16
AB7
B
652 654Right-handed 310
Helix 17
AB8
B
690 694Right-handed 310
Helix 18
AB9
B
695 702Right-handed alpha
Helix 19
AC1
B
705 722Right-handed alpha
Helix 20
AC2
B
732 742Right-handed alpha
Helix 21
AC3
B
753 764Right-handed alpha
Helix 22
AC4
B
767 771Right-handed 310
Helix 23
AC5
B
773 786Right-handed alpha
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There are 4 sheets in PDB entry 6IQN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
510 518first strand
Strand 2
A
523 529anti-parallel
Strand 3
A
539 545anti-parallel
Strand 4
A
586 590anti-parallel
Strand 5
A
575 579anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
656 659first strand
Strand 2
A
663 666anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
510 519first strand
Strand 2
B
522 529anti-parallel
Strand 3
B
539 544anti-parallel
Strand 4
B
586 590anti-parallel
Strand 5
B
575 579anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
656 659first strand
Strand 2
B
663 666anti-parallel
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