Analysis of interatomic Contacts of Structural Units in PDB entry:
6IQU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IQU entry

There are 2 chains in PDB entry 6IQU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 28ASP 286
B
 THR 27GLU 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6IQU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 51Right-handed alpha
Helix 2
AA2
A
57 75Right-handed alpha
Helix 3
AA3
A
77 90Right-handed alpha
Helix 4
AA4
A
95 109Right-handed alpha
Helix 5
AA5
A
111 126Right-handed alpha
Helix 6
AA6
A
130 143Right-handed alpha
Helix 7
AA7
A
145 158Right-handed alpha
Helix 8
AA8
A
163 175Right-handed alpha
Helix 9
AA9
A
178 192Right-handed alpha
Helix 10
AB1
A
199 207Right-handed alpha
Helix 11
AB2
A
211 223Right-handed alpha
Helix 12
AB3
A
225 247Right-handed alpha
Helix 13
AB4
A
249 262Right-handed alpha
Helix 14
AB5
A
268 282Right-handed alpha
Helix 15
AB6
B
40 56Right-handed alpha
Helix 16
AB7
B
63 79Right-handed alpha
Helix 17
AB8
B
86 95Right-handed alpha
Helix 18
AB9
B
96 98Right-handed 310
Helix 19
AC1
B
99 107Right-handed alpha
Helix 20
AC2
B
109 118Right-handed alpha
Helix 21
AC3
B
120 135Right-handed alpha
Helix 22
AC4
B
158 179Right-handed alpha
Helix 23
AC5
B
183 203Right-handed alpha
Helix 24
AC6
B
206 220Right-handed alpha
Helix 25
AC7
B
248 252Right-handed 310
Helix 26
AC8
B
276 291Right-handed alpha
Helix 27
AC9
B
307 317Right-handed alpha
Helix 28
AD1
B
360 372Right-handed alpha
Helix 29
AD2
B
398 403Right-handed alpha
Helix 30
AD3
B
438 443Right-handed alpha
Helix 31
AD4
B
448 452Right-handed 310
Helix 32
AD5
B
475 490Right-handed alpha
Helix 33
AD6
B
490 506Right-handed alpha
Helix 34
AD7
B
508 510Right-handed 310
Helix 35
AD8
B
516 543Right-handed alpha
Helix 36
AD9
B
549 553Right-handed 310
Helix 37
AE1
B
561 578Right-handed alpha
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There are 4 sheets in PDB entry 6IQU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 147first strand
Strand 2
B
512 514anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 229first strand
Strand 2
B
411 420anti-parallel
Strand 3
B
322 329anti-parallel
Strand 4
B
334 339anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 229first strand
Strand 2
B
411 420anti-parallel
Strand 3
B
387 393anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 260first strand
Strand 2
B
263 269anti-parallel
Strand 3
B
296 299parallel
Strand 4
B
350 354parallel
Strand 5
B
376 379parallel
Strand 6
B
436 437parallel
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