Analysis of interatomic Contacts of Structural Units in PDB entry:
6IS7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6IS7 entry

There are 2 chains in PDB entry 6IS7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	TYR 757
B	MET 1	ASP 542

There are 63 helices in PDB entry 6IS7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	46	Right-handed 310
Helix 2	AA2	A	47	53	Right-handed alpha
Helix 3	AA3	A	91	103	Right-handed alpha
Helix 4	AA4	A	115	124	Right-handed alpha
Helix 5	AA5	A	186	202	Right-handed alpha
Helix 6	AA6	A	214	227	Right-handed alpha
Helix 7	AA7	A	260	268	Right-handed alpha
Helix 8	AA8	A	274	283	Right-handed alpha
Helix 9	AA9	A	291	302	Right-handed alpha
Helix 10	AB1	A	304	338	Right-handed alpha
Helix 11	AB2	A	340	345	Right-handed alpha
Helix 12	AB3	A	348	364	Right-handed alpha
Helix 13	AB4	A	373	380	Right-handed alpha
Helix 14	AB5	A	407	416	Right-handed alpha
Helix 15	AB6	A	447	469	Right-handed alpha
Helix 16	AB7	A	472	491	Right-handed alpha
Helix 17	AB8	A	492	498	Right-handed alpha
Helix 18	AB9	A	506	531	Right-handed alpha
Helix 19	AC1	A	552	571	Right-handed alpha
Helix 20	AC2	A	608	612	Right-handed 310
Helix 21	AC3	A	616	632	Right-handed alpha
Helix 22	AC4	A	635	652	Right-handed alpha
Helix 23	AC5	A	656	661	Right-handed 310
Helix 24	AC6	A	669	673	Right-handed 310
Helix 25	AC7	A	677	689	Right-handed alpha
Helix 26	AC8	A	709	712	Right-handed 310
Helix 27	AC9	A	718	720	Right-handed 310
Helix 28	AD1	A	728	735	Right-handed alpha
Helix 29	AD2	A	736	746	Right-handed alpha
Helix 30	AD3	A	747	749	Right-handed 310
Helix 31	AD4	A	752	756	Right-handed 310
Helix 32	AD5	B	44	46	Right-handed 310
Helix 33	AD6	B	47	53	Right-handed alpha
Helix 34	AD7	B	91	103	Right-handed alpha
Helix 35	AD8	B	115	124	Right-handed alpha
Helix 36	AD9	B	186	202	Right-handed alpha
Helix 37	AE1	B	214	227	Right-handed alpha
Helix 38	AE2	B	260	268	Right-handed alpha
Helix 39	AE3	B	274	283	Right-handed alpha
Helix 40	AE4	B	291	302	Right-handed alpha
Helix 41	AE5	B	304	338	Right-handed alpha
Helix 42	AE6	B	340	345	Right-handed alpha
Helix 43	AE7	B	348	364	Right-handed alpha
Helix 44	AE8	B	373	380	Right-handed alpha
Helix 45	AE9	B	407	416	Right-handed alpha
Helix 46	AF1	B	419	423	Right-handed 310
Helix 47	AF2	B	447	470	Right-handed alpha
Helix 48	AF3	B	472	491	Right-handed alpha
Helix 49	AF4	B	492	498	Right-handed alpha
Helix 50	AF5	B	506	531	Right-handed alpha
Helix 51	AF6	B	552	571	Right-handed alpha
Helix 52	AF7	B	608	612	Right-handed 310
Helix 53	AF8	B	616	632	Right-handed alpha
Helix 54	AF9	B	635	652	Right-handed alpha
Helix 55	AG1	B	656	661	Right-handed 310
Helix 56	AG2	B	669	673	Right-handed 310
Helix 57	AG3	B	677	689	Right-handed alpha
Helix 58	AG4	B	709	712	Right-handed 310
Helix 59	AG5	B	718	720	Right-handed 310
Helix 60	AG6	B	728	735	Right-handed alpha
Helix 61	AG7	B	736	746	Right-handed alpha
Helix 62	AG8	B	747	749	Right-handed 310
Helix 63	AG9	B	751	756	Right-handed alpha

There are 16 sheets in PDB entry 6IS7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	10	first strand
Strand 2	A	13	22	anti-parallel
Strand 3	A	25	31	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	75	first strand
Strand 2	A	78	86	anti-parallel
Strand 3	A	37	42	anti-parallel
Strand 4	A	106	110	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	57	first strand
Strand 2	A	62	64	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	168	172	parallel
Strand 3	A	157	163	anti-parallel
Strand 4	A	137	144	anti-parallel
Strand 5	A	205	208	parallel
Strand 6	A	256	259	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	247	251	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	540	first strand
Strand 2	A	543	547	anti-parallel
Strand 3	A	395	405	anti-parallel
Strand 4	A	577	590	anti-parallel
Strand 5	A	593	597	anti-parallel
Strand 6	A	603	606	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	431	433	first strand
Strand 2	A	440	442	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	662	665	first strand
Strand 2	A	698	703	anti-parallel
Strand 3	A	714	716	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	10	first strand
Strand 2	B	13	22	anti-parallel
Strand 3	B	25	31	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	75	first strand
Strand 2	B	78	86	anti-parallel
Strand 3	B	37	42	anti-parallel
Strand 4	B	106	110	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	57	first strand
Strand 2	B	62	64	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	183	first strand
Strand 2	B	168	172	parallel
Strand 3	B	157	163	anti-parallel
Strand 4	B	137	144	anti-parallel
Strand 5	B	205	208	parallel
Strand 6	B	256	259	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	247	251	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	540	first strand
Strand 2	B	543	547	anti-parallel
Strand 3	B	395	405	anti-parallel
Strand 4	B	577	590	anti-parallel
Strand 5	B	593	597	anti-parallel
Strand 6	B	603	606	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	431	433	first strand
Strand 2	B	440	442	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	662	665	first strand
Strand 2	B	698	703	anti-parallel
Strand 3	B	714	716	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6IS7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6IS7