Analysis of interatomic Contacts of Structural Units in PDB entry:
6ISE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ISE entry

There are 2 chains in PDB entry 6ISE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 5ALA 331
A
 ARG 5ALA 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6ISE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
13 18Right-handed alpha
Helix 2
AA2
B
19 24Right-handed alpha
Helix 3
AA3
B
25 28Right-handed 310
Helix 4
AA4
B
34 36Right-handed 310
Helix 5
AA5
B
73 87Right-handed alpha
Helix 6
AA6
B
119 124Right-handed alpha
Helix 7
AA7
B
128 149Right-handed alpha
Helix 8
AA8
B
157 159Right-handed 310
Helix 9
AA9
B
174 178Right-handed 310
Helix 10
AB1
B
193 197Right-handed 310
Helix 11
AB2
B
198 203Right-handed alpha
Helix 12
AB3
B
210 227Right-handed alpha
Helix 13
AB4
B
236 249Right-handed alpha
Helix 14
AB5
B
250 261Right-handed alpha
Helix 15
AB6
B
267 272Right-handed alpha
Helix 16
AB7
B
279 284Right-handed 310
Helix 17
AB8
B
288 292Right-handed 310
Helix 18
AB9
B
293 302Right-handed alpha
Helix 19
AC1
B
313 319Right-handed alpha
Helix 20
AC2
B
320 322Right-handed 310
Helix 21
AC3
B
323 331Right-handed alpha
Helix 22
AC4
A
13 18Right-handed alpha
Helix 23
AC5
A
19 24Right-handed alpha
Helix 24
AC6
A
25 28Right-handed 310
Helix 25
AC7
A
34 36Right-handed 310
Helix 26
AC8
A
73 88Right-handed alpha
Helix 27
AC9
A
119 124Right-handed alpha
Helix 28
AD1
A
128 148Right-handed alpha
Helix 29
AD2
A
157 159Right-handed 310
Helix 30
AD3
A
174 178Right-handed 310
Helix 31
AD4
A
193 197Right-handed 310
Helix 32
AD5
A
198 203Right-handed alpha
Helix 33
AD6
A
211 227Right-handed alpha
Helix 34
AD7
A
236 249Right-handed alpha
Helix 35
AD8
A
250 261Right-handed alpha
Helix 36
AD9
A
265 273Right-handed alpha
Helix 37
AE1
A
279 284Right-handed 310
Helix 38
AE2
A
288 292Right-handed 310
Helix 39
AE3
A
293 302Right-handed alpha
Helix 40
AE4
A
307 311Right-handed 310
Helix 41
AE5
A
313 319Right-handed alpha
Helix 42
AE6
A
320 322Right-handed 310
Helix 43
AE7
A
323 329Right-handed alpha
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There are 6 sheets in PDB entry 6ISE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 46first strand
Strand 2
B
50 57anti-parallel
Strand 3
B
62 69anti-parallel
Strand 4
B
108 112anti-parallel
Strand 5
B
96 101anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 152first strand
Strand 2
B
179 180anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 164first strand
Strand 2
B
169 172anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 46first strand
Strand 2
A
50 57anti-parallel
Strand 3
A
62 69anti-parallel
Strand 4
A
108 112anti-parallel
Strand 5
A
96 101anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
179 180anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 164first strand
Strand 2
A
169 172anti-parallel
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