Analysis of interatomic Contacts of Structural Units in PDB entry:
6ISV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ISV entry

There are 2 chains in PDB entry 6ISV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3ILE 342
B
 GLY 2ILE 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6ISV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 53Right-handed alpha
Helix 2
AA2
A
101 107Right-handed alpha
Helix 3
AA3
A
108 112Right-handed 310
Helix 4
AA4
A
147 155Right-handed alpha
Helix 5
AA5
A
158 169Right-handed alpha
Helix 6
AA6
A
182 196Right-handed alpha
Helix 7
AA7
A
205 215Right-handed alpha
Helix 8
AA8
A
242 252Right-handed alpha
Helix 9
AA9
A
272 279Right-handed alpha
Helix 10
AB1
A
290 303Right-handed alpha
Helix 11
AB2
A
317 327Right-handed alpha
Helix 12
AB3
B
45 54Right-handed alpha
Helix 13
AB4
B
80 84Right-handed 310
Helix 14
AB5
B
101 106Right-handed alpha
Helix 15
AB6
B
108 112Right-handed 310
Helix 16
AB7
B
147 155Right-handed alpha
Helix 17
AB8
B
158 169Right-handed alpha
Helix 18
AB9
B
182 196Right-handed alpha
Helix 19
AC1
B
205 215Right-handed alpha
Helix 20
AC2
B
242 252Right-handed alpha
Helix 21
AC3
B
272 279Right-handed alpha
Helix 22
AC4
B
290 303Right-handed alpha
Helix 23
AC5
B
317 327Right-handed alpha
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There are 8 sheets in PDB entry 6ISV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 26first strand
Strand 2
A
7 13anti-parallel
Strand 3
A
62 63anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 135first strand
Strand 2
A
34 43anti-parallel
Strand 3
A
67 75anti-parallel
Strand 4
A
89 92anti-parallel
Strand 5
A
139 141anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 135first strand
Strand 2
A
34 43anti-parallel
Strand 3
A
333 337anti-parallel
Strand 4
A
310 314parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 220first strand
Strand 2
A
198 202parallel
Strand 3
A
175 179parallel
Strand 4
A
233 238parallel
Strand 5
A
253 261parallel
Strand 6
A
282 283parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 26first strand
Strand 2
B
7 13anti-parallel
Strand 3
B
62 63anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 135first strand
Strand 2
B
34 44anti-parallel
Strand 3
B
67 75anti-parallel
Strand 4
B
89 92anti-parallel
Strand 5
B
139 141anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 135first strand
Strand 2
B
34 44anti-parallel
Strand 3
B
333 337anti-parallel
Strand 4
B
310 314parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 220first strand
Strand 2
B
198 202parallel
Strand 3
B
175 179parallel
Strand 4
B
233 238parallel
Strand 5
B
253 261parallel
Strand 6
B
282 283parallel
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