Analysis of interatomic Contacts of Structural Units in PDB entry:
6ITG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ITG entry

There are 2 chains in PDB entry 6ITG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 19LYS 517
B
 PRO 19LYS 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6ITG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 24Right-handed 310
Helix 2
AA2
A
25 31Right-handed alpha
Helix 3
AA3
A
41 43Right-handed 310
Helix 4
AA4
A
47 60Right-handed alpha
Helix 5
AA5
A
220 226Right-handed 310
Helix 6
AA6
A
227 232Right-handed alpha
Helix 7
AA7
A
358 362Right-handed 310
Helix 8
AA8
A
465 469Right-handed 310
Helix 9
AA9
A
494 498Right-handed 310
Helix 10
AB1
B
20 24Right-handed 310
Helix 11
AB2
B
25 31Right-handed alpha
Helix 12
AB3
B
41 43Right-handed 310
Helix 13
AB4
B
47 60Right-handed alpha
Helix 14
AB5
B
220 226Right-handed 310
Helix 15
AB6
B
227 232Right-handed alpha
Helix 16
AB7
B
358 362Right-handed 310
Helix 17
AB8
B
465 469Right-handed 310
Helix 18
AB9
B
494 498Right-handed 310
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There are 10 sheets in PDB entry 6ITG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
510 513parallel
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There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 69first strand
Strand 2
A
88 91parallel
Strand 3
A
113 115parallel
Strand 4
A
139 141parallel
Strand 5
A
177 179parallel
Strand 6
A
205 207parallel
Strand 7
A
253 255parallel
Strand 8
A
277 279parallel
Strand 9
A
299 301parallel
Strand 10
A
324 326parallel
Strand 11
A
381 386parallel
Strand 12
A
421 426parallel
Strand 13
A
453 455parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 75first strand
Strand 2
A
97 107parallel
Strand 3
A
117 124parallel
Strand 4
A
144 146parallel
Strand 5
A
182 184parallel
Strand 6
A
210 212parallel
Strand 7
A
258 260parallel
Strand 8
A
282 284parallel
Strand 9
A
304 306parallel
Strand 10
A
329 331parallel
Strand 11
A
389 391parallel
Strand 12
A
429 431parallel
Strand 13
A
458 460parallel
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There are 13 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 82first strand
Strand 2
A
97 107parallel
Strand 3
A
131 133parallel
Strand 4
A
169 171parallel
Strand 5
A
193 195parallel
Strand 6
A
238 241parallel
Strand 7
A
267 272parallel
Strand 8
A
289 294parallel
Strand 9
A
316 318parallel
Strand 10
A
350 352parallel
Strand 11
A
395 399parallel
Strand 12
A
439 442parallel
Strand 13
A
462 464parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 482first strand
Strand 2
A
485 488anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 39first strand
Strand 2
B
510 513parallel
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There are 13 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 69first strand
Strand 2
B
88 91parallel
Strand 3
B
113 115parallel
Strand 4
B
139 141parallel
Strand 5
B
177 179parallel
Strand 6
B
205 207parallel
Strand 7
B
253 255parallel
Strand 8
B
277 279parallel
Strand 9
B
299 301parallel
Strand 10
B
324 326parallel
Strand 11
B
381 386parallel
Strand 12
B
421 426parallel
Strand 13
B
453 455parallel
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There are 13 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 75first strand
Strand 2
B
97 107parallel
Strand 3
B
117 124parallel
Strand 4
B
144 146parallel
Strand 5
B
182 184parallel
Strand 6
B
210 212parallel
Strand 7
B
258 260parallel
Strand 8
B
282 284parallel
Strand 9
B
304 306parallel
Strand 10
B
329 331parallel
Strand 11
B
389 391parallel
Strand 12
B
429 431parallel
Strand 13
B
458 460parallel
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There are 13 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 82first strand
Strand 2
B
97 107parallel
Strand 3
B
131 133parallel
Strand 4
B
169 171parallel
Strand 5
B
193 195parallel
Strand 6
B
238 241parallel
Strand 7
B
267 272parallel
Strand 8
B
289 294parallel
Strand 9
B
316 318parallel
Strand 10
B
350 352parallel
Strand 11
B
395 399parallel
Strand 12
B
439 442parallel
Strand 13
B
462 464parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
479 482first strand
Strand 2
B
485 488anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il