Analysis of interatomic Contacts of Structural Units in PDB entry:
6ITM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ITM entry

There are 4 chains in PDB entry 6ITM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 258VAL 485
B
 ASP 2ASP 13
C
 GLU 258VAL 485
D
 ASP 2ASP 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6ITM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
260 275Right-handed alpha
Helix 2
AA2
A
280 290Right-handed alpha
Helix 3
AA3
A
293 318Right-handed alpha
Helix 4
AA4
A
321 325Right-handed 310
Helix 5
AA5
A
326 352Right-handed alpha
Helix 6
AA6
A
355 368Right-handed alpha
Helix 7
AA7
A
372 389Right-handed alpha
Helix 8
AA8
A
392 405Right-handed alpha
Helix 9
AA9
A
414 437Right-handed alpha
Helix 10
AB1
A
442 467Right-handed alpha
Helix 11
AB2
A
476 484Right-handed alpha
Helix 12
AB3
B
3 12Right-handed alpha
Helix 13
AB4
C
260 277Right-handed alpha
Helix 14
AB5
C
280 290Right-handed alpha
Helix 15
AB6
C
293 318Right-handed alpha
Helix 16
AB7
C
321 325Right-handed 310
Helix 17
AB8
C
326 352Right-handed alpha
Helix 18
AB9
C
355 368Right-handed alpha
Helix 19
AC1
C
372 389Right-handed alpha
Helix 20
AC2
C
392 405Right-handed alpha
Helix 21
AC3
C
414 437Right-handed alpha
Helix 22
AC4
C
442 470Right-handed alpha
Helix 23
AC5
C
476 484Right-handed alpha
Helix 24
AC6
D
3 12Right-handed alpha
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There are no sheets in PDB entry 6ITM
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