Analysis of interatomic Contacts of Structural Units in PDB entry:
6IUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IUQ entry

There are 2 chains in PDB entry 6IUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3ASN 328
B
 ASN 2ASN 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6IUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 23Right-handed alpha
Helix 2
AA2
A
24 35Right-handed alpha
Helix 3
AA3
A
44 61Right-handed alpha
Helix 4
AA4
A
99 104Right-handed alpha
Helix 5
AA5
A
106 115Right-handed alpha
Helix 6
AA6
A
116 126Right-handed alpha
Helix 7
AA7
A
127 130Right-handed 310
Helix 8
AA8
A
134 136Right-handed 310
Helix 9
AA9
A
237 242Right-handed 310
Helix 10
AB1
A
246 251Right-handed 310
Helix 11
AB2
A
252 262Right-handed alpha
Helix 12
AB3
A
263 268Right-handed 310
Helix 13
AB4
A
269 274Right-handed alpha
Helix 14
AB5
A
274 287Right-handed alpha
Helix 15
AB6
A
295 311Right-handed alpha
Helix 16
AB7
A
311 328Right-handed alpha
Helix 17
AB8
B
15 23Right-handed alpha
Helix 18
AB9
B
24 35Right-handed alpha
Helix 19
AC1
B
44 61Right-handed alpha
Helix 20
AC2
B
99 104Right-handed alpha
Helix 21
AC3
B
106 115Right-handed alpha
Helix 22
AC4
B
116 126Right-handed alpha
Helix 23
AC5
B
127 130Right-handed 310
Helix 24
AC6
B
134 136Right-handed 310
Helix 25
AC7
B
237 242Right-handed 310
Helix 26
AC8
B
246 251Right-handed 310
Helix 27
AC9
B
252 262Right-handed alpha
Helix 28
AD1
B
263 268Right-handed 310
Helix 29
AD2
B
269 274Right-handed alpha
Helix 30
AD3
B
274 287Right-handed alpha
Helix 31
AD4
B
295 311Right-handed alpha
Helix 32
AD5
B
311 328Right-handed alpha
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There are 4 sheets in PDB entry 6IUQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
203 208anti-parallel
Strand 3
A
165 172anti-parallel
Strand 4
A
223 231anti-parallel
Strand 5
A
138 145anti-parallel
Strand 6
A
93 96anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 197first strand
Strand 2
A
185 188anti-parallel
Strand 3
A
213 216anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 39first strand
Strand 2
B
203 208anti-parallel
Strand 3
B
165 172anti-parallel
Strand 4
B
223 231anti-parallel
Strand 5
B
138 145anti-parallel
Strand 6
B
93 96anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 197first strand
Strand 2
B
185 188anti-parallel
Strand 3
B
213 216anti-parallel
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