Analysis of interatomic Contacts of Structural Units in PDB entry:
6IUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IUT entry

There are 3 chains in PDB entry 6IUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 VAL 1SER 219
L
 ALA 0GLY 213
A
 LEU 52LYS 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6IUT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
85 89Right-handed 310
Helix 2
AA2
H
160 162Right-handed 310
Helix 3
AA3
H
189 193Right-handed 310
Helix 4
AA4
H
205 208Right-handed 310
Helix 5
AA5
L
56 60Right-handed 310
Helix 6
AA6
L
79 83Right-handed 310
Helix 7
AA7
L
122 127Right-handed alpha
Helix 8
AA8
L
184 188Right-handed alpha
Helix 9
AA9
A
57 63Right-handed alpha
Helix 10
AB1
A
97 107Right-handed alpha
Helix 11
AB2
A
118 122Right-handed 310
Helix 12
AB3
A
183 192Right-handed alpha
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There are 15 sheets in PDB entry 6IUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 6first strand
Strand 2
H
17 24anti-parallel
Strand 3
H
76 81anti-parallel
Strand 4
H
66 71anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 11first strand
Strand 2
H
111 115parallel
Strand 3
H
90 97anti-parallel
Strand 4
H
32 38anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
55 58anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 11first strand
Strand 2
H
111 115parallel
Strand 3
H
90 97anti-parallel
Strand 4
H
106 107anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
124 128first strand
Strand 2
H
141 149anti-parallel
Strand 3
H
180 187anti-parallel
Strand 4
H
167 169anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
124 128first strand
Strand 2
H
141 149anti-parallel
Strand 3
H
180 187anti-parallel
Strand 4
H
173 174anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
155 158first strand
Strand 2
H
198 204anti-parallel
Strand 3
H
209 215anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
7 10first strand
Strand 2
L
103 107parallel
Strand 3
L
85 91anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 48anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
7 10first strand
Strand 2
L
103 107parallel
Strand 3
L
85 91anti-parallel
Strand 4
L
97 99anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
16 21first strand
Strand 2
L
70 75anti-parallel
Strand 3
L
62 67anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
115 119first strand
Strand 2
L
130 140anti-parallel
Strand 3
L
174 183anti-parallel
Strand 4
L
160 164anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
154 155first strand
Strand 2
L
146 151anti-parallel
Strand 3
L
193 198anti-parallel
Strand 4
L
206 210anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 115first strand
Strand 2
A
252 257anti-parallel
Strand 3
A
171 180anti-parallel
Strand 4
A
247 250anti-parallel
Strand 5
A
147 149anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 115first strand
Strand 2
A
252 257anti-parallel
Strand 3
A
171 180anti-parallel
Strand 4
A
225 233anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
141 142anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 165first strand
Strand 2
A
238 243anti-parallel
Strand 3
A
198 202anti-parallel
Strand 4
A
205 209anti-parallel
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