Analysis of interatomic Contacts of Structural Units in PDB entry:
6IV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IV6 entry

There are 6 chains in PDB entry 6IV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 24
A
 THR 26PRO 152
A
 LEU 154PRO 634
A
 VAL 636LYS 815
A
 ARG 817ARG 1261
G
 A 3 G 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6IV6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 34Right-handed alpha
Helix 2
AA2
A
34 65Right-handed alpha
Helix 3
AA3
A
72 81Right-handed alpha
Helix 4
AA4
A
92 109Right-handed alpha
Helix 5
AA5
A
141 146Right-handed alpha
Helix 6
AA6
A
163 168Right-handed 310
Helix 7
AA7
A
169 175Right-handed alpha
Helix 8
AA8
A
186 193Right-handed alpha
Helix 9
AA9
A
194 207Right-handed alpha
Helix 10
AB1
A
217 225Right-handed alpha
Helix 11
AB2
A
230 234Right-handed 310
Helix 12
AB3
A
240 244Right-handed 310
Helix 13
AB4
A
245 258Right-handed alpha
Helix 14
AB5
A
270 279Right-handed alpha
Helix 15
AB6
A
315 326Right-handed alpha
Helix 16
AB7
A
335 343Right-handed alpha
Helix 17
AB8
A
355 357Right-handed 310
Helix 18
AB9
A
358 366Right-handed alpha
Helix 19
AC1
A
371 380Right-handed alpha
Helix 20
AC2
A
381 385Right-handed 310
Helix 21
AC3
A
425 432Right-handed alpha
Helix 22
AC4
A
455 460Right-handed alpha
Helix 23
AC5
A
464 469Right-handed alpha
Helix 24
AC6
A
494 501Right-handed alpha
Helix 25
AC7
A
501 511Right-handed alpha
Helix 26
AC8
A
524 539Right-handed alpha
Helix 27
AC9
A
540 553Right-handed alpha
Helix 28
AD1
A
579 584Right-handed alpha
Helix 29
AD2
A
628 633Right-handed alpha
Helix 30
AD3
A
648 657Right-handed alpha
Helix 31
AD4
A
659 663Right-handed 310
Helix 32
AD5
A
669 686Right-handed alpha
Helix 33
AD6
A
704 716Right-handed alpha
Helix 34
AD7
A
725 734Right-handed alpha
Helix 35
AD8
A
745 749Right-handed 310
Helix 36
AD9
A
757 764Right-handed alpha
Helix 37
AE1
A
768 772Right-handed 310
Helix 38
AE2
A
826 831Right-handed alpha
Helix 39
AE3
A
850 854Right-handed 310
Helix 40
AE4
A
855 865Right-handed alpha
Helix 41
AE5
A
915 926Right-handed alpha
Helix 42
AE6
A
934 962Right-handed alpha
Helix 43
AE7
A
982 999Right-handed alpha
Helix 44
AE8
A
1063 1072Right-handed alpha
Helix 45
AE9
A
1133 1138Right-handed alpha
Helix 46
AF1
A
1154 1159Right-handed alpha
Helix 47
AF2
A
1165 1179Right-handed alpha
Helix 48
AF3
A
1216 1238Right-handed alpha
Helix 49
AF4
A
1250 1260Right-handed alpha
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There are 7 sheets in PDB entry 6IV6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
721 724first strand
Strand 2
A
618 621anti-parallel
Strand 3
A
585 589anti-parallel
Strand 4
A
594 598anti-parallel
Strand 5
A
739 744anti-parallel
Strand 6
A
12 22anti-parallel
Strand 7
A
836 842anti-parallel
Strand 8
A
777 779anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
561 564first strand
Strand 2
A
785 788anti-parallel
Strand 3
A
833 834anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 625first strand
Strand 2
A
717 718anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 897first strand
Strand 2
A
881 886anti-parallel
Strand 3
A
869 875anti-parallel
Strand 4
A
963 968parallel
Strand 5
A
1036 1039parallel
Strand 6
A
1032 1033anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
900 905first strand
Strand 2
A
910 914anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1077 1079first strand
Strand 2
A
1086 1091anti-parallel
Strand 3
A
1105 1109anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1181 1183first strand
Strand 2
A
1190 1192anti-parallel
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