Analysis of interatomic Contacts of Structural Units in PDB entry:
6IVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IVE entry

There are 6 chains in PDB entry 6IVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2THR 169
B
 VAL 3VAL 167
C
 MET 1ALA 168
D
 MET 1VAL 167
E
 SER 2ALA 168
F
 SER 2THR 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6IVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
148 163Right-handed alpha
Helix 2
AA2
B
148 163Right-handed alpha
Helix 3
AA3
C
148 163Right-handed alpha
Helix 4
AA4
D
148 163Right-handed alpha
Helix 5
AA5
E
148 163Right-handed alpha
Helix 6
AA6
F
148 163Right-handed alpha
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There are 22 sheets in PDB entry 6IVE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
24 31parallel
Strand 3
A
42 52parallel
Strand 4
A
72 74parallel
Strand 5
A
90 91parallel
Strand 6
A
108 109parallel
Strand 7
A
126 127parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
102 103parallel
Strand 3
A
85 87parallel
Strand 4
A
63 65parallel
Strand 5
A
42 52parallel
Strand 6
A
24 31parallel
Strand 7
A
3 6parallel
Strand 8
B
164 166anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
36 37parallel
Strand 3
A
57 58parallel
Strand 4
A
79 80parallel
Strand 5
A
96 97parallel
Strand 6
A
114 115parallel
Strand 7
A
131 134parallel
Strand 8
A
139 143anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 168first strand
Strand 2
C
2 6anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
C
164 166anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
24 31parallel
Strand 3
B
42 52parallel
Strand 4
B
63 65parallel
Strand 5
B
85 87parallel
Strand 6
B
102 103parallel
Strand 7
B
120 121parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
24 31parallel
Strand 3
B
42 52parallel
Strand 4
B
72 74parallel
Strand 5
B
90 91parallel
Strand 6
B
108 109parallel
Strand 7
B
126 127parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
36 37parallel
Strand 3
B
57 58parallel
Strand 4
B
79 80parallel
Strand 5
B
96 97parallel
Strand 6
B
114 115parallel
Strand 7
B
131 134parallel
Strand 8
B
139 143anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 13first strand
Strand 2
C
24 31parallel
Strand 3
C
42 52parallel
Strand 4
C
63 65parallel
Strand 5
C
85 87parallel
Strand 6
C
102 103parallel
Strand 7
C
120 121parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 13first strand
Strand 2
C
24 31parallel
Strand 3
C
42 52parallel
Strand 4
C
72 74parallel
Strand 5
C
90 91parallel
Strand 6
C
108 109parallel
Strand 7
C
126 127parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 19first strand
Strand 2
C
36 37parallel
Strand 3
C
57 58parallel
Strand 4
C
79 80parallel
Strand 5
C
96 97parallel
Strand 6
C
114 115parallel
Strand 7
C
131 134parallel
Strand 8
C
139 143anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 6first strand
Strand 2
E
164 167anti-parallel
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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 13first strand
Strand 2
D
24 31parallel
Strand 3
D
42 52parallel
Strand 4
D
63 65parallel
Strand 5
D
85 87parallel
Strand 6
D
102 103parallel
Strand 7
D
120 121parallel
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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 13first strand
Strand 2
D
24 31parallel
Strand 3
D
42 52parallel
Strand 4
D
72 74parallel
Strand 5
D
90 91parallel
Strand 6
D
108 109parallel
Strand 7
D
126 127parallel
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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
18 19first strand
Strand 2
D
36 37parallel
Strand 3
D
57 58parallel
Strand 4
D
79 80parallel
Strand 5
D
96 97parallel
Strand 6
D
114 115parallel
Strand 7
D
131 134parallel
Strand 8
D
139 143anti-parallel
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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
164 166first strand
Strand 2
F
3 6anti-parallel
Strand 3
F
24 31parallel
Strand 4
F
42 52parallel
Strand 5
F
63 65parallel
Strand 6
F
85 87parallel
Strand 7
F
102 103parallel
Strand 8
F
120 121parallel
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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
12 13first strand
Strand 2
F
24 31parallel
Strand 3
F
42 52parallel
Strand 4
F
72 74parallel
Strand 5
F
90 91parallel
Strand 6
F
108 109parallel
Strand 7
F
126 127parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 6first strand
Strand 2
F
164 167anti-parallel
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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
12 13first strand
Strand 2
E
24 31parallel
Strand 3
E
42 52parallel
Strand 4
E
63 65parallel
Strand 5
E
85 87parallel
Strand 6
E
102 103parallel
Strand 7
E
120 121parallel
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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
12 13first strand
Strand 2
E
24 31parallel
Strand 3
E
42 52parallel
Strand 4
E
72 74parallel
Strand 5
E
90 91parallel
Strand 6
E
108 109parallel
Strand 7
E
126 127parallel
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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
18 19first strand
Strand 2
E
36 37parallel
Strand 3
E
57 58parallel
Strand 4
E
79 80parallel
Strand 5
E
96 97parallel
Strand 6
E
114 115parallel
Strand 7
E
131 134parallel
Strand 8
E
139 143anti-parallel
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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
18 19first strand
Strand 2
F
36 37parallel
Strand 3
F
57 58parallel
Strand 4
F
79 80parallel
Strand 5
F
96 97parallel
Strand 6
F
114 115parallel
Strand 7
F
131 134parallel
Strand 8
F
139 143anti-parallel
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