Analysis of interatomic Contacts of Structural Units in PDB entry:
6IVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IVP entry

There are 5 chains in PDB entry 6IVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 22GLU 294
B
 SER 22HIS 290
C
 LYS 23PRO 291
D
 SER 22GLN 289
E
 SER 22HIS 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 55 helices in PDB entry 6IVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 41Right-handed alpha
Helix 2
AA2
A
44 49Right-handed alpha
Helix 3
AA3
A
53 104Right-handed alpha
Helix 4
AA4
A
107 130Right-handed alpha
Helix 5
AA5
A
134 142Right-handed alpha
Helix 6
AA6
A
143 153Right-handed alpha
Helix 7
AA7
A
155 174Right-handed alpha
Helix 8
AA8
A
178 205Right-handed alpha
Helix 9
AA9
A
208 235Right-handed alpha
Helix 10
AB1
A
237 260Right-handed alpha
Helix 11
AB2
A
271 287Right-handed alpha
Helix 12
AB3
B
23 41Right-handed alpha
Helix 13
AB4
B
44 49Right-handed alpha
Helix 14
AB5
B
53 104Right-handed alpha
Helix 15
AB6
B
107 131Right-handed alpha
Helix 16
AB7
B
134 142Right-handed alpha
Helix 17
AB8
B
143 153Right-handed alpha
Helix 18
AB9
B
155 174Right-handed alpha
Helix 19
AC1
B
178 205Right-handed alpha
Helix 20
AC2
B
208 235Right-handed alpha
Helix 21
AC3
B
237 261Right-handed alpha
Helix 22
AC4
B
271 284Right-handed alpha
Helix 23
AC5
C
24 41Right-handed alpha
Helix 24
AC6
C
44 49Right-handed alpha
Helix 25
AC7
C
53 104Right-handed alpha
Helix 26
AC8
C
107 131Right-handed alpha
Helix 27
AC9
C
134 142Right-handed alpha
Helix 28
AD1
C
143 153Right-handed alpha
Helix 29
AD2
C
155 174Right-handed alpha
Helix 30
AD3
C
178 205Right-handed alpha
Helix 31
AD4
C
209 235Right-handed alpha
Helix 32
AD5
C
237 261Right-handed alpha
Helix 33
AD6
C
271 288Right-handed alpha
Helix 34
AD7
D
23 41Right-handed alpha
Helix 35
AD8
D
44 49Right-handed alpha
Helix 36
AD9
D
53 104Right-handed alpha
Helix 37
AE1
D
107 130Right-handed alpha
Helix 38
AE2
D
134 142Right-handed alpha
Helix 39
AE3
D
143 153Right-handed alpha
Helix 40
AE4
D
155 174Right-handed alpha
Helix 41
AE5
D
178 205Right-handed alpha
Helix 42
AE6
D
209 235Right-handed alpha
Helix 43
AE7
D
237 260Right-handed alpha
Helix 44
AE8
D
271 288Right-handed alpha
Helix 45
AE9
E
24 41Right-handed alpha
Helix 46
AF1
E
44 49Right-handed alpha
Helix 47
AF2
E
53 104Right-handed alpha
Helix 48
AF3
E
107 131Right-handed alpha
Helix 49
AF4
E
134 142Right-handed alpha
Helix 50
AF5
E
143 153Right-handed alpha
Helix 51
AF6
E
155 174Right-handed alpha
Helix 52
AF7
E
178 204Right-handed alpha
Helix 53
AF8
E
210 235Right-handed alpha
Helix 54
AF9
E
237 261Right-handed alpha
Helix 55
AG1
E
269 288Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6IVP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il