Analysis of interatomic Contacts of Structural Units in PDB entry:
6IXP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IXP entry

There are 6 chains in PDB entry 6IXP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 1152ASP 1572
B
 ILE 403LEU 418
C
 THR 408PRO 425
D
 ASN 1152ASP 1572
E
 ILE 403LEU 418
F
 THR 408PRO 425
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6IXP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1152 1166Right-handed alpha
Helix 2
AA2
A
1166 1178Right-handed alpha
Helix 3
AA3
A
1194 1199Right-handed alpha
Helix 4
AA4
A
1199 1215Right-handed alpha
Helix 5
AA5
A
1217 1238Right-handed alpha
Helix 6
AA6
A
1240 1242Right-handed 310
Helix 7
AA7
A
1243 1272Right-handed alpha
Helix 8
AA8
A
1273 1277Right-handed 310
Helix 9
AA9
A
1280 1326Right-handed alpha
Helix 10
AB1
A
1354 1372Right-handed alpha
Helix 11
AB2
A
1375 1399Right-handed alpha
Helix 12
AB3
A
1406 1427Right-handed alpha
Helix 13
AB4
A
1431 1436Right-handed alpha
Helix 14
AB5
A
1436 1446Right-handed alpha
Helix 15
AB6
A
1452 1463Right-handed alpha
Helix 16
AB7
A
1467 1477Right-handed alpha
Helix 17
AB8
A
1488 1505Right-handed alpha
Helix 18
AB9
A
1532 1537Right-handed 310
Helix 19
AC1
A
1555 1572Right-handed alpha
Helix 20
AC2
C
414 423Right-handed alpha
Helix 21
AC3
D
1153 1166Right-handed alpha
Helix 22
AC4
D
1166 1178Right-handed alpha
Helix 23
AC5
D
1194 1199Right-handed alpha
Helix 24
AC6
D
1199 1215Right-handed alpha
Helix 25
AC7
D
1217 1238Right-handed alpha
Helix 26
AC8
D
1240 1242Right-handed 310
Helix 27
AC9
D
1243 1272Right-handed alpha
Helix 28
AD1
D
1273 1277Right-handed 310
Helix 29
AD2
D
1280 1326Right-handed alpha
Helix 30
AD3
D
1354 1372Right-handed alpha
Helix 31
AD4
D
1375 1399Right-handed alpha
Helix 32
AD5
D
1406 1427Right-handed alpha
Helix 33
AD6
D
1431 1436Right-handed alpha
Helix 34
AD7
D
1436 1446Right-handed alpha
Helix 35
AD8
D
1452 1463Right-handed alpha
Helix 36
AD9
D
1467 1477Right-handed alpha
Helix 37
AE1
D
1488 1505Right-handed alpha
Helix 38
AE2
D
1532 1537Right-handed 310
Helix 39
AE3
D
1555 1572Right-handed alpha
Helix 40
AE4
F
414 423Right-handed alpha
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There are 2 sheets in PDB entry 6IXP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1545 1546first strand
Strand 2
B
413 414parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1545 1546first strand
Strand 2
E
413 414parallel
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