Analysis of interatomic Contacts of Structural Units in PDB entry:
6IY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IY2 entry

There are 11 chains in PDB entry 6IY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 36ALA 135
B
 ALA 15GLY 102
C
 ARG 11GLU 121
D
 GLY 26LYS 125
E
 LYS 37ALA 135
F
 LEU 22GLY 102
G
 LYS 9LYS 119
H
 ARG 29LYS 125
J
 A 1 T 147
I
 A 1 T 147
O
 LEU 670GLY 1348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 6IY2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 57Right-handed alpha
Helix 2
AA2
A
63 77Right-handed alpha
Helix 3
AA3
A
85 114Right-handed alpha
Helix 4
AA4
A
120 132Right-handed alpha
Helix 5
AA5
B
30 42Right-handed alpha
Helix 6
AA6
B
49 76Right-handed alpha
Helix 7
AA7
B
82 93Right-handed alpha
Helix 8
AA8
C
16 22Right-handed alpha
Helix 9
AA9
C
26 37Right-handed alpha
Helix 10
AB1
C
46 73Right-handed alpha
Helix 11
AB2
C
79 90Right-handed alpha
Helix 12
AB3
C
90 97Right-handed alpha
Helix 13
AB4
D
37 49Right-handed alpha
Helix 14
AB5
D
55 84Right-handed alpha
Helix 15
AB6
D
90 102Right-handed alpha
Helix 16
AB7
D
103 123Right-handed alpha
Helix 17
AB8
E
44 57Right-handed alpha
Helix 18
AB9
E
63 77Right-handed alpha
Helix 19
AC1
E
85 114Right-handed alpha
Helix 20
AC2
E
120 131Right-handed alpha
Helix 21
AC3
F
25 29Right-handed 310
Helix 22
AC4
F
30 42Right-handed alpha
Helix 23
AC5
F
49 76Right-handed alpha
Helix 24
AC6
F
82 94Right-handed alpha
Helix 25
AC7
G
16 22Right-handed alpha
Helix 26
AC8
G
26 37Right-handed alpha
Helix 27
AC9
G
46 68Right-handed alpha
Helix 28
AD1
G
79 90Right-handed alpha
Helix 29
AD2
G
90 97Right-handed alpha
Helix 30
AD3
H
37 49Right-handed alpha
Helix 31
AD4
H
55 85Right-handed alpha
Helix 32
AD5
H
90 102Right-handed alpha
Helix 33
AD6
H
103 124Right-handed alpha
Helix 34
AD7
O
671 682Right-handed alpha
Helix 35
AD8
O
684 689Right-handed alpha
Helix 36
AD9
O
744 748Right-handed alpha
Helix 37
AE1
O
768 784Right-handed alpha
Helix 38
AE2
O
797 812Right-handed alpha
Helix 39
AE3
O
824 826Right-handed 310
Helix 40
AE4
O
827 839Right-handed alpha
Helix 41
AE5
O
850 862Right-handed alpha
Helix 42
AE6
O
873 879Right-handed alpha
Helix 43
AE7
O
881 886Right-handed alpha
Helix 44
AE8
O
895 900Right-handed alpha
Helix 45
AE9
O
904 912Right-handed alpha
Helix 46
AF1
O
933 938Right-handed alpha
Helix 47
AF2
O
943 948Right-handed alpha
Helix 48
AF3
O
952 957Right-handed alpha
Helix 49
AF4
O
976 987Right-handed alpha
Helix 50
AF5
O
1020 1031Right-handed alpha
Helix 51
AF6
O
1050 1061Right-handed alpha
Helix 52
AF7
O
1068 1073Right-handed alpha
Helix 53
AF8
O
1086 1103Right-handed alpha
Helix 54
AF9
O
1112 1126Right-handed alpha
Helix 55
AG1
O
1139 1150Right-handed alpha
Helix 56
AG2
O
1187 1198Right-handed alpha
Helix 57
AG3
O
1216 1229Right-handed alpha
Helix 58
AG4
O
1232 1239Right-handed alpha
Helix 59
AG5
O
1240 1243Right-handed 310
Helix 60
AG6
O
1251 1259Right-handed alpha
Helix 61
AG7
O
1263 1269Right-handed alpha
Helix 62
AG8
O
1279 1287Right-handed alpha
Helix 63
AG9
O
1290 1307Right-handed alpha
Helix 64
AH1
O
1337 1346Right-handed alpha
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There are 9 sheets in PDB entry 6IY2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
B
45 46parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 43first strand
Strand 2
D
88 89parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
D
53 54parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 102first strand
Strand 2
F
96 98parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 119first strand
Strand 2
F
45 46parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
42 43first strand
Strand 2
H
88 89parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
77 78first strand
Strand 2
H
53 54parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
789 790first strand
Strand 2
O
918 922parallel
Strand 3
O
890 893parallel
Strand 4
O
819 822parallel
Strand 5
O
868 869parallel
Strand 6
O
844 845parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
1007 1013first strand
Strand 2
O
1207 1213parallel
Strand 3
O
1177 1180parallel
Strand 4
O
1106 1109parallel
Strand 5
O
1158 1160parallel
Strand 6
O
1130 1132parallel
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