Analysis of interatomic Contacts of Structural Units in PDB entry:
6IZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IZ8 entry

There are 5 chains in PDB entry 6IZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -8GLY 213
B
 MET 0GLU 214
C
 HIS -14PRO 225
D
 SER 3GLU 214
F
 HIS 1GLY 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6IZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 45Right-handed alpha
Helix 2
AA2
A
47 53Right-handed alpha
Helix 3
AA3
A
100 107Right-handed alpha
Helix 4
AA4
A
109 122Right-handed alpha
Helix 5
AA5
A
128 139Right-handed alpha
Helix 6
AA6
A
164 178Right-handed alpha
Helix 7
AA7
A
203 211Right-handed 310
Helix 8
AA8
B
22 45Right-handed alpha
Helix 9
AA9
B
47 53Right-handed alpha
Helix 10
AB1
B
100 106Right-handed alpha
Helix 11
AB2
B
109 122Right-handed alpha
Helix 12
AB3
B
128 138Right-handed alpha
Helix 13
AB4
B
164 178Right-handed alpha
Helix 14
AB5
B
203 206Right-handed 310
Helix 15
AB6
B
207 212Right-handed alpha
Helix 16
AB7
C
-3 2Right-handed alpha
Helix 17
AB8
C
22 45Right-handed alpha
Helix 18
AB9
C
47 55Right-handed alpha
Helix 19
AC1
C
100 107Right-handed alpha
Helix 20
AC2
C
109 123Right-handed alpha
Helix 21
AC3
C
128 138Right-handed alpha
Helix 22
AC4
C
164 177Right-handed alpha
Helix 23
AC5
C
203 211Right-handed 310
Helix 24
AC6
D
22 45Right-handed alpha
Helix 25
AC7
D
47 54Right-handed alpha
Helix 26
AC8
D
100 106Right-handed alpha
Helix 27
AC9
D
109 121Right-handed alpha
Helix 28
AD1
D
122 124Right-handed 310
Helix 29
AD2
D
129 138Right-handed alpha
Helix 30
AD3
D
164 178Right-handed alpha
Helix 31
AD4
D
203 211Right-handed 310
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There are 4 sheets in PDB entry 6IZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
4 8anti-parallel
Strand 3
A
89 95anti-parallel
Strand 4
A
71 77anti-parallel
Strand 5
A
58 62anti-parallel
Strand 6
A
180 185anti-parallel
Strand 7
A
194 199anti-parallel
Strand 8
D
157 160anti-parallel
Strand 9
D
150 153anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
158 160anti-parallel
Strand 3
D
194 199anti-parallel
Strand 4
D
180 185anti-parallel
Strand 5
D
58 62anti-parallel
Strand 6
D
71 80anti-parallel
Strand 7
D
86 95anti-parallel
Strand 8
D
5 8anti-parallel
Strand 9
D
17 19anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 19first strand
Strand 2
B
5 8anti-parallel
Strand 3
B
89 95anti-parallel
Strand 4
B
71 77anti-parallel
Strand 5
B
58 62anti-parallel
Strand 6
B
180 185anti-parallel
Strand 7
B
194 199anti-parallel
Strand 8
C
157 160anti-parallel
Strand 9
C
152 153anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 153first strand
Strand 2
B
157 160anti-parallel
Strand 3
C
195 199anti-parallel
Strand 4
C
180 184anti-parallel
Strand 5
C
58 62anti-parallel
Strand 6
C
71 77anti-parallel
Strand 7
C
89 95anti-parallel
Strand 8
C
3 9anti-parallel
Strand 9
C
16 19anti-parallel
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