Analysis of interatomic Contacts of Structural Units in PDB entry:
6IZC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IZC entry

There are 2 chains in PDB entry 6IZC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 29SER 291
B
 LYS 29SER 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6IZC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 42Right-handed alpha
Helix 2
AA2
A
69 71Right-handed 310
Helix 3
AA3
A
72 86Right-handed alpha
Helix 4
AA4
A
98 102Right-handed 310
Helix 5
AA5
A
108 112Right-handed 310
Helix 6
AA6
A
119 130Right-handed alpha
Helix 7
AA7
A
131 143Right-handed alpha
Helix 8
AA8
A
144 155Right-handed alpha
Helix 9
AA9
A
167 172Right-handed 310
Helix 10
AB1
A
182 196Right-handed alpha
Helix 11
AB2
A
200 213Right-handed alpha
Helix 12
AB3
A
220 225Right-handed 310
Helix 13
AB4
A
269 287Right-handed alpha
Helix 14
AB5
B
30 42Right-handed alpha
Helix 15
AB6
B
69 71Right-handed 310
Helix 16
AB7
B
72 86Right-handed alpha
Helix 17
AB8
B
98 102Right-handed 310
Helix 18
AB9
B
108 112Right-handed 310
Helix 19
AC1
B
119 130Right-handed alpha
Helix 20
AC2
B
131 143Right-handed alpha
Helix 21
AC3
B
144 155Right-handed alpha
Helix 22
AC4
B
167 172Right-handed 310
Helix 23
AC5
B
182 196Right-handed alpha
Helix 24
AC6
B
200 213Right-handed alpha
Helix 25
AC7
B
220 225Right-handed 310
Helix 26
AC8
B
269 287Right-handed alpha
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There are 6 sheets in PDB entry 6IZC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
44 51anti-parallel
Strand 3
A
254 264anti-parallel
Strand 4
A
242 251anti-parallel
Strand 5
A
230 238anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
180 181anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 96first strand
Strand 2
A
116 118anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
44 51anti-parallel
Strand 3
B
254 264anti-parallel
Strand 4
B
242 251anti-parallel
Strand 5
B
230 238anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 67first strand
Strand 2
B
180 181anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
94 96first strand
Strand 2
B
116 118anti-parallel
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