Analysis of interatomic Contacts of Structural Units in PDB entry:
6IZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IZL entry

There are 3 chains in PDB entry 6IZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 51ALA 243
B
 GLY 41PRO 241
C
 VAL 30PRO 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 6IZL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 105Right-handed alpha
Helix 2
AA2
A
142 146Right-handed 310
Helix 3
AA3
A
148 159Right-handed alpha
Helix 4
AA4
A
192 196Right-handed 310
Helix 5
AA5
A
211 215Right-handed 310
Helix 6
AA6
B
42 48Right-handed alpha
Helix 7
AA7
B
80 82Right-handed 310
Helix 8
AA8
B
91 95Right-handed 310
Helix 9
AA9
B
98 105Right-handed alpha
Helix 10
AB1
B
142 146Right-handed 310
Helix 11
AB2
B
148 158Right-handed alpha
Helix 12
AB3
B
192 196Right-handed 310
Helix 13
AB4
B
211 215Right-handed 310
Helix 14
AB5
C
98 104Right-handed alpha
Helix 15
AB6
C
142 146Right-handed 310
Helix 16
AB7
C
148 159Right-handed alpha
Helix 17
AB8
C
192 197Right-handed alpha
Helix 18
AB9
C
240 248Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 6IZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 73first strand
Strand 2
A
221 234anti-parallel
Strand 3
A
109 120anti-parallel
Strand 4
A
171 173anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 73first strand
Strand 2
A
221 234anti-parallel
Strand 3
A
109 120anti-parallel
Strand 4
A
184 185anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 90first strand
Strand 2
A
199 205anti-parallel
Strand 3
A
130 136anti-parallel
Strand 4
A
163 166anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 74first strand
Strand 2
B
220 234anti-parallel
Strand 3
B
109 121anti-parallel
Strand 4
B
171 173anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 74first strand
Strand 2
B
220 234anti-parallel
Strand 3
B
109 121anti-parallel
Strand 4
B
184 185anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 89first strand
Strand 2
B
200 210anti-parallel
Strand 3
B
128 136anti-parallel
Strand 4
B
163 166anti-parallel
Strand 5
C
50 52anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 65first strand
Strand 2
C
228 237anti-parallel
Strand 3
C
107 121anti-parallel
Strand 4
C
171 173anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
69 73first strand
Strand 2
C
221 226anti-parallel
Strand 3
C
107 121anti-parallel
Strand 4
C
184 185anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
84 89first strand
Strand 2
C
200 205anti-parallel
Strand 3
C
131 136anti-parallel
Strand 4
C
163 165anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il