Analysis of interatomic Contacts of Structural Units in PDB entry:
6IZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IZT entry

There are 2 chains in PDB entry 6IZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 13GLU 266
B
 GLY 13GLU 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6IZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 43Right-handed alpha
Helix 2
AA2
A
60 78Right-handed alpha
Helix 3
AA3
A
125 130Right-handed alpha
Helix 4
AA4
A
131 136Right-handed 310
Helix 5
AA5
A
143 160Right-handed alpha
Helix 6
AA6
A
207 215Right-handed alpha
Helix 7
AA7
A
224 237Right-handed alpha
Helix 8
AA8
B
36 43Right-handed alpha
Helix 9
AA9
B
61 78Right-handed alpha
Helix 10
AB1
B
125 130Right-handed alpha
Helix 11
AB2
B
131 136Right-handed 310
Helix 12
AB3
B
143 161Right-handed alpha
Helix 13
AB4
B
207 214Right-handed alpha
Helix 14
AB5
B
224 239Right-handed alpha
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There are 6 sheets in PDB entry 6IZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
51 55anti-parallel
Strand 3
A
20 30anti-parallel
Strand 4
A
99 106parallel
Strand 5
A
84 91anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
112 121anti-parallel
Strand 3
A
180 188parallel
Strand 4
A
167 175anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 222first strand
Strand 2
A
194 201anti-parallel
Strand 3
A
257 265parallel
Strand 4
A
243 250anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
51 55anti-parallel
Strand 3
B
20 30anti-parallel
Strand 4
B
98 106parallel
Strand 5
B
84 92anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 141first strand
Strand 2
B
112 121anti-parallel
Strand 3
B
180 188parallel
Strand 4
B
167 175anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 201first strand
Strand 2
B
257 264parallel
Strand 3
B
244 250anti-parallel
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