Analysis of interatomic Contacts of Structural Units in PDB entry:
6IZV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6IZV entry

There are 2 chains in PDB entry 6IZV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
0	MET 1	PHE 349
1	MET 1	PHE 349

There are 28 helices in PDB entry 6IZV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	0	38	44	Right-handed alpha
Helix 2	AA2	0	70	76	Right-handed alpha
Helix 3	AA3	0	91	104	Right-handed alpha
Helix 4	AA4	0	125	130	Right-handed alpha
Helix 5	AA5	0	130	141	Right-handed alpha
Helix 6	AA6	0	169	175	Right-handed alpha
Helix 7	AA7	0	180	184	Right-handed 310
Helix 8	AA8	0	229	245	Right-handed alpha
Helix 9	AA9	0	251	262	Right-handed alpha
Helix 10	AB1	0	273	296	Right-handed alpha
Helix 11	AB2	0	297	301	Right-handed 310
Helix 12	AB3	0	310	317	Right-handed alpha
Helix 13	AB4	0	319	324	Right-handed 310
Helix 14	AB5	0	336	345	Right-handed alpha
Helix 15	AB6	1	38	44	Right-handed alpha
Helix 16	AB7	1	70	76	Right-handed alpha
Helix 17	AB8	1	91	104	Right-handed alpha
Helix 18	AB9	1	125	130	Right-handed alpha
Helix 19	AC1	1	130	141	Right-handed alpha
Helix 20	AC2	1	169	175	Right-handed alpha
Helix 21	AC3	1	180	184	Right-handed 310
Helix 22	AC4	1	229	245	Right-handed alpha
Helix 23	AC5	1	251	262	Right-handed alpha
Helix 24	AC6	1	273	296	Right-handed alpha
Helix 25	AC7	1	297	301	Right-handed 310
Helix 26	AC8	1	310	317	Right-handed alpha
Helix 27	AC9	1	319	324	Right-handed 310
Helix 28	AD1	1	336	345	Right-handed alpha

There are 10 sheets in PDB entry 6IZV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	24	28	first strand
Strand 2	14	19	anti-parallel
Strand 3	4	8	anti-parallel
Strand 4	116	122	parallel
Strand 5	164	167	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	31	33	first strand
Strand 2	65	69	anti-parallel
Strand 3	54	57	anti-parallel
Strand 4	142	147	anti-parallel
Strand 5	153	157	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	214	216	first strand
Strand 2	201	208	anti-parallel
Strand 3	222	224	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	214	216	first strand
Strand 2	201	208	anti-parallel
Strand 3	190	196	anti-parallel
Strand 4	303	309	parallel
Strand 5	329	330	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	0	263	265	first strand
Strand 2	0	270	272	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	24	28	first strand
Strand 2	1	14	19	anti-parallel
Strand 3	1	4	8	anti-parallel
Strand 4	1	116	122	parallel
Strand 5	1	164	167	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	31	33	first strand
Strand 2	1	65	69	anti-parallel
Strand 3	1	54	57	anti-parallel
Strand 4	1	142	147	anti-parallel
Strand 5	1	153	157	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	214	216	first strand
Strand 2	1	201	208	anti-parallel
Strand 3	1	222	224	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	214	216	first strand
Strand 2	1	201	208	anti-parallel
Strand 3	1	190	196	anti-parallel
Strand 4	1	303	309	parallel
Strand 5	1	329	330	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	263	265	first strand
Strand 2	1	270	272	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6IZV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6IZV