Analysis of interatomic Contacts of Structural Units in PDB entry:
6IZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IZZ entry

There is 1 chain in PDB entry 6IZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 272SER 885
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 6IZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
272 287Right-handed alpha
Helix 2
AA2
A
321 327Right-handed alpha
Helix 3
AA3
A
328 333Right-handed 310
Helix 4
AA4
A
334 340Right-handed alpha
Helix 5
AA5
A
346 357Right-handed alpha
Helix 6
AA6
A
366 385Right-handed alpha
Helix 7
AA7
A
394 404Right-handed alpha
Helix 8
AA8
A
430 443Right-handed alpha
Helix 9
AA9
A
477 489Right-handed alpha
Helix 10
AB1
A
489 494Right-handed alpha
Helix 11
AB2
A
498 503Right-handed alpha
Helix 12
AB3
A
510 523Right-handed alpha
Helix 13
AB4
A
536 541Right-handed 310
Helix 14
AB5
A
542 551Right-handed alpha
Helix 15
AB6
A
552 556Right-handed 310
Helix 16
AB7
A
557 572Right-handed alpha
Helix 17
AB8
A
604 625Right-handed alpha
Helix 18
AB9
A
629 635Right-handed alpha
Helix 19
AC1
A
640 656Right-handed alpha
Helix 20
AC2
A
671 677Right-handed 310
Helix 21
AC3
A
678 684Right-handed alpha
Helix 22
AC4
A
702 706Right-handed 310
Helix 23
AC5
A
730 739Right-handed alpha
Helix 24
AC6
A
747 766Right-handed alpha
Helix 25
AC7
A
769 783Right-handed alpha
Helix 26
AC8
A
808 818Right-handed alpha
Helix 27
AC9
A
832 836Right-handed 310
Helix 28
AD1
A
840 847Right-handed alpha
Helix 29
AD2
A
853 862Right-handed alpha
Helix 30
AD3
A
862 875Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 6IZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 308first strand
Strand 2
A
586 594anti-parallel
Strand 3
A
575 583anti-parallel
Strand 4
A
451 452parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
658 661first strand
Strand 2
A
664 667anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
712 717first strand
Strand 2
A
723 728anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il