Analysis of interatomic Contacts of Structural Units in PDB entry:
6J1X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6J1X entry

There is 1 chain in PDB entry 6J1X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLN 381	THR 916

There are 24 helices in PDB entry 6J1X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	413	424	Right-handed alpha
Helix 2	AA2	B	433	444	Right-handed alpha
Helix 3	AA3	B	546	561	Right-handed alpha
Helix 4	AA4	B	572	574	Right-handed 310
Helix 5	AA5	B	575	586	Right-handed alpha
Helix 6	AA6	B	588	594	Right-handed 310
Helix 7	AA7	B	610	623	Right-handed alpha
Helix 8	AA8	B	624	629	Right-handed 310
Helix 9	AA9	B	645	650	Right-handed 310
Helix 10	AB1	B	652	670	Right-handed alpha
Helix 11	AB2	B	679	687	Right-handed alpha
Helix 12	AB3	B	692	700	Right-handed alpha
Helix 13	AB4	B	700	713	Right-handed alpha
Helix 14	AB5	B	742	746	Right-handed 310
Helix 15	AB6	B	752	767	Right-handed alpha
Helix 16	AB7	B	769	782	Right-handed alpha
Helix 17	AB8	B	785	790	Right-handed 310
Helix 18	AB9	B	793	803	Right-handed alpha
Helix 19	AC1	B	808	815	Right-handed alpha
Helix 20	AC2	B	825	838	Right-handed alpha
Helix 21	AC3	B	839	852	Right-handed alpha
Helix 22	AC4	B	860	863	Right-handed 310
Helix 23	AC5	B	889	891	Right-handed 310
Helix 24	AC6	B	901	915	Right-handed alpha

There are 7 sheets in PDB entry 6J1X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	387	391	first strand
Strand 2	B	397	401	anti-parallel
Strand 3	B	407	408	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	502	506	first strand
Strand 2	B	512	516	anti-parallel
Strand 3	B	521	523	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	571	first strand
Strand 2	B	595	600	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	631	635	first strand
Strand 2	B	639	643	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	725	730	first strand
Strand 2	B	733	738	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	817	819	first strand
Strand 2	B	874	877	parallel
Strand 3	B	893	896	parallel
Strand 4	B	886	888	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	865	866	first strand
Strand 2	B	869	870	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6J1X

Analysis of interatomic Contacts of Structural Units in PDB entry:
6J1X