Analysis of interatomic Contacts of Structural Units in PDB entry:
6J21


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6J21 entry

There is 1 chain in PDB entry 6J21 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 25ARG 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6J21. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 59Right-handed alpha
Helix 2
AA2
A
65 96Right-handed alpha
Helix 3
AA3
A
100 135Right-handed alpha
Helix 4
AA4
A
143 168Right-handed alpha
Helix 5
AA5
A
190 205Right-handed alpha
Helix 6
AA6
A
205 225Right-handed alpha
Helix 7
AA7
A
1001 1010Right-handed alpha
Helix 8
AA8
A
1022 1035Right-handed alpha
Helix 9
AA9
A
1040 1047Right-handed alpha
Helix 10
AB1
A
1048 1063Right-handed alpha
Helix 11
AB2
A
1063 1068Right-handed alpha
Helix 12
AB3
A
1070 1079Right-handed alpha
Helix 13
AB4
A
1081 1090Right-handed alpha
Helix 14
AB5
A
1092 1098Right-handed alpha
Helix 15
AB6
A
1098 1112Right-handed alpha
Helix 16
AB7
A
1114 237Right-handed 310
Helix 17
AB8
A
241 270Right-handed alpha
Helix 18
AB9
A
271 273Right-handed 310
Helix 19
AC1
A
274 279Right-handed alpha
Helix 20
AC2
A
282 309Right-handed alpha
Helix 21
AC3
A
309 319Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6J21.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 173first strand
Strand 2
A
178 182anti-parallel
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