Analysis of interatomic Contacts of Structural Units in PDB entry:
6J32


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6J32 entry

There are 4 chains in PDB entry 6J32 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2PRO 395
B
 PRO 2ALA 396
C
 PRO 2PRO 395
D
 PRO 2ARG 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 6J32. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 20Right-handed 310
Helix 2
AA2
A
21 31Right-handed alpha
Helix 3
AA3
A
40 42Right-handed 310
Helix 4
AA4
A
43 50Right-handed alpha
Helix 5
AA5
A
73 97Right-handed alpha
Helix 6
AA6
A
111 120Right-handed alpha
Helix 7
AA7
A
136 147Right-handed alpha
Helix 8
AA8
A
153 168Right-handed alpha
Helix 9
AA9
A
176 181Right-handed alpha
Helix 10
AB1
A
190 194Right-handed 310
Helix 11
AB2
A
196 200Right-handed 310
Helix 12
AB3
A
242 254Right-handed alpha
Helix 13
AB4
A
288 294Right-handed alpha
Helix 14
AB5
A
304 314Right-handed alpha
Helix 15
AB6
A
326 337Right-handed alpha
Helix 16
AB7
A
349 363Right-handed alpha
Helix 17
AB8
A
363 380Right-handed alpha
Helix 18
AB9
A
381 392Right-handed alpha
Helix 19
AC1
B
14 20Right-handed 310
Helix 20
AC2
B
21 31Right-handed alpha
Helix 21
AC3
B
40 42Right-handed 310
Helix 22
AC4
B
43 50Right-handed alpha
Helix 23
AC5
B
73 97Right-handed alpha
Helix 24
AC6
B
111 120Right-handed alpha
Helix 25
AC7
B
136 141Right-handed alpha
Helix 26
AC8
B
141 147Right-handed alpha
Helix 27
AC9
B
156 168Right-handed alpha
Helix 28
AD1
B
176 181Right-handed alpha
Helix 29
AD2
B
190 194Right-handed 310
Helix 30
AD3
B
196 200Right-handed 310
Helix 31
AD4
B
243 254Right-handed alpha
Helix 32
AD5
B
288 294Right-handed alpha
Helix 33
AD6
B
304 314Right-handed alpha
Helix 34
AD7
B
326 337Right-handed alpha
Helix 35
AD8
B
349 363Right-handed alpha
Helix 36
AD9
B
363 379Right-handed alpha
Helix 37
AE1
B
381 392Right-handed alpha
Helix 38
AE2
C
14 20Right-handed 310
Helix 39
AE3
C
21 31Right-handed alpha
Helix 40
AE4
C
40 42Right-handed 310
Helix 41
AE5
C
43 50Right-handed alpha
Helix 42
AE6
C
74 97Right-handed alpha
Helix 43
AE7
C
111 120Right-handed alpha
Helix 44
AE8
C
136 147Right-handed alpha
Helix 45
AE9
C
153 168Right-handed alpha
Helix 46
AF1
C
176 181Right-handed alpha
Helix 47
AF2
C
190 194Right-handed 310
Helix 48
AF3
C
196 200Right-handed 310
Helix 49
AF4
C
242 253Right-handed alpha
Helix 50
AF5
C
266 270Right-handed 310
Helix 51
AF6
C
288 294Right-handed alpha
Helix 52
AF7
C
304 314Right-handed alpha
Helix 53
AF8
C
326 337Right-handed alpha
Helix 54
AF9
C
349 363Right-handed alpha
Helix 55
AG1
C
363 379Right-handed alpha
Helix 56
AG2
C
381 393Right-handed alpha
Helix 57
AG3
D
14 20Right-handed 310
Helix 58
AG4
D
21 31Right-handed alpha
Helix 59
AG5
D
40 42Right-handed 310
Helix 60
AG6
D
43 50Right-handed alpha
Helix 61
AG7
D
73 97Right-handed alpha
Helix 62
AG8
D
111 120Right-handed alpha
Helix 63
AG9
D
134 141Right-handed alpha
Helix 64
AH1
D
141 147Right-handed alpha
Helix 65
AH2
D
153 168Right-handed alpha
Helix 66
AH3
D
176 181Right-handed alpha
Helix 67
AH4
D
190 194Right-handed 310
Helix 68
AH5
D
196 200Right-handed 310
Helix 69
AH6
D
242 254Right-handed alpha
Helix 70
AH7
D
288 295Right-handed alpha
Helix 71
AH8
D
304 314Right-handed alpha
Helix 72
AH9
D
325 337Right-handed alpha
Helix 73
AI1
D
349 363Right-handed alpha
Helix 74
AI2
D
363 379Right-handed alpha
Helix 75
AI3
D
381 392Right-handed alpha
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There are 8 sheets in PDB entry 6J32. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
34 39parallel
Strand 3
A
6 10parallel
Strand 4
A
103 107parallel
Strand 5
A
124 128parallel
Strand 6
A
185 187parallel
Strand 7
A
205 207parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 284first strand
Strand 2
A
259 264parallel
Strand 3
A
229 233parallel
Strand 4
A
296 301parallel
Strand 5
A
318 320parallel
Strand 6
A
340 342parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
34 39parallel
Strand 3
B
6 10parallel
Strand 4
B
103 107parallel
Strand 5
B
124 128parallel
Strand 6
B
184 187parallel
Strand 7
B
205 207parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
281 284first strand
Strand 2
B
259 264parallel
Strand 3
B
229 233parallel
Strand 4
B
296 301parallel
Strand 5
B
318 320parallel
Strand 6
B
340 342parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 56first strand
Strand 2
C
34 39parallel
Strand 3
C
6 10parallel
Strand 4
C
103 107parallel
Strand 5
C
124 128parallel
Strand 6
C
185 187parallel
Strand 7
C
205 207parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
281 284first strand
Strand 2
C
259 264parallel
Strand 3
C
229 234parallel
Strand 4
C
298 301parallel
Strand 5
C
318 320parallel
Strand 6
C
340 342parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 56first strand
Strand 2
D
34 39parallel
Strand 3
D
6 10parallel
Strand 4
D
103 107parallel
Strand 5
D
124 128parallel
Strand 6
D
184 187parallel
Strand 7
D
205 207parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
281 284first strand
Strand 2
D
259 264parallel
Strand 3
D
229 234parallel
Strand 4
D
298 301parallel
Strand 5
D
318 320parallel
Strand 6
D
340 342parallel
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