Analysis of interatomic Contacts of Structural Units in PDB entry:
6J6X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6J6X entry

There are 4 chains in PDB entry 6J6X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2TRP 59
A
 VAL 61THR 91
A
 THR 93ASN 327
B
 PRO 15ASN 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6J6X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 26Right-handed alpha
Helix 2
AA2
A
57 77Right-handed alpha
Helix 3
AA3
A
83 96Right-handed alpha
Helix 4
AA4
A
101 113Right-handed alpha
Helix 5
AA5
A
118 131Right-handed alpha
Helix 6
AA6
A
136 151Right-handed alpha
Helix 7
AA7
A
170 187Right-handed alpha
Helix 8
AA8
A
194 208Right-handed alpha
Helix 9
AA9
A
212 223Right-handed alpha
Helix 10
AB1
A
223 230Right-handed alpha
Helix 11
AB2
A
233 250Right-handed alpha
Helix 12
AB3
A
287 306Right-handed alpha
Helix 13
AB4
A
309 326Right-handed alpha
Helix 14
AB5
B
20 29Right-handed alpha
Helix 15
AB6
B
37 42Right-handed alpha
Helix 16
AB7
B
45 60Right-handed alpha
Helix 17
AB8
B
62 66Right-handed 310
Helix 18
AB9
B
67 77Right-handed alpha
Helix 19
AC1
B
95 108Right-handed alpha
Helix 20
AC2
B
110 114Right-handed 310
Helix 21
AC3
B
115 125Right-handed alpha
Helix 22
AC4
B
142 157Right-handed alpha
Helix 23
AC5
B
158 162Right-handed 310
Helix 24
AC6
B
163 173Right-handed alpha
Helix 25
AC7
B
190 204Right-handed alpha
Helix 26
AC8
B
206 210Right-handed 310
Helix 27
AC9
B
211 222Right-handed alpha
Helix 28
AD1
B
238 253Right-handed alpha
Helix 29
AD2
B
259 270Right-handed alpha
Helix 30
AD3
B
287 302Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6J6X.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
53 56parallel
Strand 3
A
47 49anti-parallel
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