Analysis of interatomic Contacts of Structural Units in PDB entry:
6J73


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6J73 entry

There are 2 chains in PDB entry 6J73 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ALA 594
B
 VAL 1ALA 594
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6J73. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 16Right-handed alpha
Helix 2
AA2
A
18 34Right-handed alpha
Helix 3
AA3
A
48 58Right-handed alpha
Helix 4
AA4
A
90 94Right-handed 310
Helix 5
AA5
A
102 106Right-handed 310
Helix 6
AA6
A
109 117Right-handed 310
Helix 7
AA7
A
152 160Right-handed 310
Helix 8
AA8
A
177 191Right-handed alpha
Helix 9
AA9
A
206 221Right-handed alpha
Helix 10
AB1
A
231 242Right-handed alpha
Helix 11
AB2
A
243 251Right-handed alpha
Helix 12
AB3
A
251 263Right-handed alpha
Helix 13
AB4
A
263 299Right-handed alpha
Helix 14
AB5
A
302 320Right-handed alpha
Helix 15
AB6
A
325 362Right-handed alpha
Helix 16
AB7
A
365 410Right-handed alpha
Helix 17
AB8
A
496 563Right-handed alpha
Helix 18
AB9
A
565 568Right-handed 310
Helix 19
AC1
A
569 592Right-handed alpha
Helix 20
AC2
B
2 16Right-handed alpha
Helix 21
AC3
B
18 34Right-handed alpha
Helix 22
AC4
B
48 58Right-handed alpha
Helix 23
AC5
B
90 94Right-handed 310
Helix 24
AC6
B
102 107Right-handed 310
Helix 25
AC7
B
152 160Right-handed 310
Helix 26
AC8
B
177 191Right-handed alpha
Helix 27
AC9
B
206 221Right-handed alpha
Helix 28
AD1
B
231 241Right-handed alpha
Helix 29
AD2
B
243 251Right-handed alpha
Helix 30
AD3
B
251 263Right-handed alpha
Helix 31
AD4
B
263 299Right-handed alpha
Helix 32
AD5
B
302 320Right-handed alpha
Helix 33
AD6
B
325 363Right-handed alpha
Helix 34
AD7
B
364 368Right-handed 310
Helix 35
AD8
B
369 410Right-handed alpha
Helix 36
AD9
B
496 563Right-handed alpha
Helix 37
AE1
B
565 590Right-handed alpha
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There are 2 sheets in PDB entry 6J73. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 101first strand
Strand 2
A
84 88anti-parallel
Strand 3
A
121 128anti-parallel
Strand 4
A
74 78parallel
Strand 5
A
137 141anti-parallel
Strand 6
A
37 42parallel
Strand 7
A
165 171parallel
Strand 8
A
194 199parallel
Strand 9
A
227 229parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 101first strand
Strand 2
B
84 88anti-parallel
Strand 3
B
121 128anti-parallel
Strand 4
B
74 78parallel
Strand 5
B
137 141anti-parallel
Strand 6
B
37 43parallel
Strand 7
B
165 171parallel
Strand 8
B
194 199parallel
Strand 9
B
227 229parallel
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