Analysis of interatomic Contacts of Structural Units in PDB entry:
6J7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6J7C entry

There is 1 chain in PDB entry 6J7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1ARG 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6J7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 44Right-handed alpha
Helix 2
AA2
A
44 53Right-handed alpha
Helix 3
AA3
A
88 102Right-handed alpha
Helix 4
AA4
A
177 180Right-handed 310
Helix 5
AA5
A
184 186Right-handed 310
Helix 6
AA6
A
187 206Right-handed alpha
Helix 7
AA7
A
251 265Right-handed alpha
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There are 2 sheets in PDB entry 6J7C. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 15 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
235 241anti-parallel
Strand 3
A
219 226anti-parallel
Strand 4
A
170 175parallel
Strand 5
A
158 166anti-parallel
Strand 6
A
144 154anti-parallel
Strand 7
A
297 306anti-parallel
Strand 8
A
133 140anti-parallel
Strand 9
A
121 130anti-parallel
Strand 10
A
111 118anti-parallel
Strand 11
A
74 80parallel
Strand 12
A
62 67anti-parallel
Strand 13
A
17 22parallel
Strand 14
A
3 14anti-parallel
Strand 15
A
308 319anti-parallel
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There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
235 241anti-parallel
Strand 3
A
273 277parallel
Strand 4
A
283 294anti-parallel
Strand 5
A
297 306anti-parallel
Strand 6
A
133 140anti-parallel
Strand 7
A
121 130anti-parallel
Strand 8
A
111 118anti-parallel
Strand 9
A
74 80parallel
Strand 10
A
62 67anti-parallel
Strand 11
A
17 22parallel
Strand 12
A
3 14anti-parallel
Strand 13
A
308 319anti-parallel
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