Analysis of interatomic Contacts of Structural Units in PDB entry:
6J7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6J7H entry

There are 4 chains in PDB entry 6J7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 16ALA 261
B
 GLN 15ALA 261
C
 GLN 15ALA 261
D
 GLN 15ALA 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6J7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 42Right-handed alpha
Helix 2
AA2
A
52 54Right-handed 310
Helix 3
AA3
A
55 68Right-handed alpha
Helix 4
AA4
A
82 98Right-handed alpha
Helix 5
AA5
A
114 118Right-handed 310
Helix 6
AA6
A
119 131Right-handed alpha
Helix 7
AA7
A
131 142Right-handed alpha
Helix 8
AA8
A
156 161Right-handed alpha
Helix 9
AA9
A
167 189Right-handed alpha
Helix 10
AB1
A
190 192Right-handed 310
Helix 11
AB2
A
214 221Right-handed alpha
Helix 12
AB3
A
229 242Right-handed alpha
Helix 13
AB4
A
243 246Right-handed 310
Helix 14
AB5
B
29 42Right-handed alpha
Helix 15
AB6
B
52 54Right-handed 310
Helix 16
AB7
B
55 68Right-handed alpha
Helix 17
AB8
B
82 98Right-handed alpha
Helix 18
AB9
B
114 118Right-handed 310
Helix 19
AC1
B
119 131Right-handed alpha
Helix 20
AC2
B
131 143Right-handed alpha
Helix 21
AC3
B
156 161Right-handed alpha
Helix 22
AC4
B
167 189Right-handed alpha
Helix 23
AC5
B
190 192Right-handed 310
Helix 24
AC6
B
214 220Right-handed alpha
Helix 25
AC7
B
229 242Right-handed alpha
Helix 26
AC8
B
243 246Right-handed 310
Helix 27
AC9
C
29 42Right-handed alpha
Helix 28
AD1
C
52 54Right-handed 310
Helix 29
AD2
C
55 68Right-handed alpha
Helix 30
AD3
C
82 98Right-handed alpha
Helix 31
AD4
C
114 118Right-handed 310
Helix 32
AD5
C
119 131Right-handed alpha
Helix 33
AD6
C
131 143Right-handed alpha
Helix 34
AD7
C
156 160Right-handed 310
Helix 35
AD8
C
167 189Right-handed alpha
Helix 36
AD9
C
190 192Right-handed 310
Helix 37
AE1
C
214 221Right-handed alpha
Helix 38
AE2
C
230 242Right-handed alpha
Helix 39
AE3
C
243 246Right-handed 310
Helix 40
AE4
D
29 42Right-handed alpha
Helix 41
AE5
D
52 54Right-handed 310
Helix 42
AE6
D
55 68Right-handed alpha
Helix 43
AE7
D
82 98Right-handed alpha
Helix 44
AE8
D
114 118Right-handed 310
Helix 45
AE9
D
119 131Right-handed alpha
Helix 46
AF1
D
131 142Right-handed alpha
Helix 47
AF2
D
156 160Right-handed 310
Helix 48
AF3
D
167 189Right-handed alpha
Helix 49
AF4
D
190 192Right-handed 310
Helix 50
AF5
D
214 221Right-handed alpha
Helix 51
AF6
D
229 242Right-handed alpha
Helix 52
AF7
D
243 246Right-handed 310
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There are 5 sheets in PDB entry 6J7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 77first strand
Strand 2
A
45 50parallel
Strand 3
A
21 24parallel
Strand 4
A
102 105parallel
Strand 5
A
150 154parallel
Strand 6
A
194 200parallel
Strand 7
A
252 255parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 77first strand
Strand 2
B
45 50parallel
Strand 3
B
21 24parallel
Strand 4
B
102 105parallel
Strand 5
B
150 154parallel
Strand 6
B
194 200parallel
Strand 7
B
252 255parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 77first strand
Strand 2
C
45 50parallel
Strand 3
C
21 24parallel
Strand 4
C
102 105parallel
Strand 5
C
150 154parallel
Strand 6
C
194 200parallel
Strand 7
C
252 255parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 204first strand
Strand 2
C
228 229parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
73 77first strand
Strand 2
D
45 50parallel
Strand 3
D
21 24parallel
Strand 4
D
102 105parallel
Strand 5
D
150 154parallel
Strand 6
D
194 200parallel
Strand 7
D
252 255parallel
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