Analysis of interatomic Contacts of Structural Units in PDB entry:
6JAX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JAX entry

There is 1 chain in PDB entry 6JAX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1606ILE 1992
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6JAX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1621 1624Right-handed 310
Helix 2
AA2
A
1626 1630Right-handed 310
Helix 3
AA3
A
1632 1636Right-handed 310
Helix 4
AA4
A
1661 1666Right-handed alpha
Helix 5
AA5
A
1669 1676Right-handed alpha
Helix 6
AA6
A
1677 1681Right-handed 310
Helix 7
AA7
A
1691 1695Right-handed 310
Helix 8
AA8
A
1697 1704Right-handed alpha
Helix 9
AA9
A
1705 1724Right-handed alpha
Helix 10
AB1
A
1737 1741Right-handed 310
Helix 11
AB2
A
1747 1765Right-handed alpha
Helix 12
AB3
A
1766 1768Right-handed 310
Helix 13
AB4
A
1778 1786Right-handed alpha
Helix 14
AB5
A
1787 1795Right-handed alpha
Helix 15
AB6
A
1807 1811Right-handed 310
Helix 16
AB7
A
1831 1842Right-handed alpha
Helix 17
AB8
A
1845 1847Right-handed 310
Helix 18
AB9
A
1902 1912Right-handed alpha
Helix 19
AC1
A
1939 1953Right-handed alpha
Helix 20
AC2
A
1962 1966Right-handed 310
Helix 21
AC3
A
1977 1989Right-handed alpha
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There are 3 sheets in PDB entry 6JAX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1657 1659first strand
Strand 2
A
1643 1651anti-parallel
Strand 3
A
1683 1689parallel
Strand 4
A
1727 1731parallel
Strand 5
A
1770 1775parallel
Strand 6
A
1797 1800parallel
Strand 7
A
1849 1854parallel
Strand 8
A
1957 1961parallel
Strand 9
A
1613 1619parallel
Strand 10
A
1643 1651parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1884 1887first strand
Strand 2
A
1856 1862anti-parallel
Strand 3
A
1899 1901anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1884 1887first strand
Strand 2
A
1856 1862anti-parallel
Strand 3
A
1933 1936anti-parallel
Strand 4
A
1927 1930anti-parallel
Strand 5
A
1915 1917anti-parallel
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