Analysis of interatomic Contacts of Structural Units in PDB entry:
6JCK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JCK entry

There are 2 chains in PDB entry 6JCK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 745ASP 826
B
 GLU 13SER 91
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 6JCK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
770 776Right-handed alpha
Helix 2
AA2
B
39 48Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6JCK.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
762 765first strand
Strand 2
A
746 750anti-parallel
Strand 3
A
817 824parallel
Strand 4
A
784 790anti-parallel
Strand 5
A
800 803anti-parallel
Strand 6
B
27 31parallel
Strand 7
B
14 20anti-parallel
Strand 8
B
84 90parallel
Strand 9
B
54 57anti-parallel
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