Analysis of interatomic Contacts of Structural Units in PDB entry:
6JD6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JD6 entry

There are 2 chains in PDB entry 6JD6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 32THR 230
B
 ASP 59HIS 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6JD6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 45Right-handed alpha
Helix 2
AA2
A
48 58Right-handed alpha
Helix 3
AA3
A
72 80Right-handed alpha
Helix 4
AA4
A
82 92Right-handed alpha
Helix 5
AA5
A
105 113Right-handed alpha
Helix 6
AA6
A
115 125Right-handed alpha
Helix 7
AA7
A
138 146Right-handed alpha
Helix 8
AA8
A
148 158Right-handed alpha
Helix 9
AA9
A
171 179Right-handed alpha
Helix 10
AB1
A
181 191Right-handed alpha
Helix 11
AB2
A
204 211Right-handed alpha
Helix 12
AB3
A
217 228Right-handed alpha
Helix 13
AB4
B
60 65Right-handed 310
Helix 14
AB5
B
66 74Right-handed alpha
Helix 15
AB6
B
89 97Right-handed alpha
Helix 16
AB7
B
99 107Right-handed alpha
Helix 17
AB8
B
122 130Right-handed alpha
Helix 18
AB9
B
132 142Right-handed alpha
Helix 19
AC1
B
155 163Right-handed alpha
Helix 20
AC2
B
165 175Right-handed alpha
Helix 21
AC3
B
188 197Right-handed alpha
Helix 22
AC4
B
198 208Right-handed alpha
Helix 23
AC5
B
221 227Right-handed alpha
Helix 24
AC6
B
232 245Right-handed alpha
Helix 25
AC7
B
246 249Right-handed 310
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There are no sheets in PDB entry 6JD6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il