Analysis of interatomic Contacts of Structural Units in PDB entry:
6JF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JF0 entry

There are 2 chains in PDB entry 6JF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 207ASP 475
B
 GLU 207LYS 474
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6JF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
207 226Right-handed alpha
Helix 2
AA2
A
229 239Right-handed alpha
Helix 3
AA3
A
251 262Right-handed alpha
Helix 4
AA4
A
276 303Right-handed alpha
Helix 5
AA5
A
310 334Right-handed alpha
Helix 6
AA6
A
350 356Right-handed alpha
Helix 7
AA7
A
360 363Right-handed 310
Helix 8
AA8
A
364 376Right-handed alpha
Helix 9
AA9
A
380 393Right-handed alpha
Helix 10
AB1
A
403 425Right-handed alpha
Helix 11
AB2
A
430 460Right-handed alpha
Helix 12
AB3
A
466 474Right-handed alpha
Helix 13
AB4
B
208 226Right-handed alpha
Helix 14
AB5
B
229 239Right-handed alpha
Helix 15
AB6
B
251 262Right-handed alpha
Helix 16
AB7
B
277 303Right-handed alpha
Helix 17
AB8
B
310 334Right-handed alpha
Helix 18
AB9
B
350 356Right-handed alpha
Helix 19
AC1
B
359 376Right-handed alpha
Helix 20
AC2
B
380 393Right-handed alpha
Helix 21
AC3
B
403 425Right-handed alpha
Helix 22
AC4
B
430 458Right-handed alpha
Helix 23
AC5
B
468 474Right-handed alpha
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There are 2 sheets in PDB entry 6JF0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
346 349parallel
Strand 3
A
338 341anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 249first strand
Strand 2
B
346 349parallel
Strand 3
B
338 341anti-parallel
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