Analysis of interatomic Contacts of Structural Units in PDB entry:
6JG0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JG0 entry

There is 1 chain in PDB entry 6JG0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 1164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6JG0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 12Right-handed alpha
Helix 2
AA2
A
38 51Right-handed alpha
Helix 3
AA3
A
59 80Right-handed alpha
Helix 4
AA4
A
83 91Right-handed alpha
Helix 5
AA5
A
92 107Right-handed alpha
Helix 6
AA6
A
107 113Right-handed alpha
Helix 7
AA7
A
114 123Right-handed alpha
Helix 8
AA8
A
125 136Right-handed alpha
Helix 9
AA9
A
136 142Right-handed alpha
Helix 10
AB1
A
142 156Right-handed alpha
Helix 11
AB2
A
1107 1119Right-handed alpha
Helix 12
AB3
A
1140 1145Right-handed alpha
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There are 3 sheets in PDB entry 6JG0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 19first strand
Strand 2
A
25 28anti-parallel
Strand 3
A
31 34anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 1080first strand
Strand 2
A
1083 1089anti-parallel
Strand 3
A
1097 1100anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1125 1128first strand
Strand 2
A
1149 1153anti-parallel
Strand 3
A
1156 1160anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il