Analysis of interatomic Contacts of Structural Units in PDB entry:
6JHA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JHA entry

There are 2 chains in PDB entry 6JHA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 266
B
 MET 1ALA 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6JHA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
40 55Right-handed alpha
Helix 3
AA3
A
69 85Right-handed alpha
Helix 4
AA4
A
103 107Right-handed 310
Helix 5
AA5
A
108 117Right-handed alpha
Helix 6
AA6
A
118 138Right-handed alpha
Helix 7
AA7
A
158 179Right-handed alpha
Helix 8
AA8
A
195 204Right-handed alpha
Helix 9
AA9
A
215 224Right-handed alpha
Helix 10
AB1
A
231 243Right-handed alpha
Helix 11
AB2
A
244 248Right-handed 310
Helix 12
AB3
A
260 264Right-handed 310
Helix 13
AB4
B
17 30Right-handed alpha
Helix 14
AB5
B
40 55Right-handed alpha
Helix 15
AB6
B
69 85Right-handed alpha
Helix 16
AB7
B
103 107Right-handed 310
Helix 17
AB8
B
108 117Right-handed alpha
Helix 18
AB9
B
118 138Right-handed alpha
Helix 19
AC1
B
147 151Right-handed 310
Helix 20
AC2
B
154 156Right-handed 310
Helix 21
AC3
B
157 179Right-handed alpha
Helix 22
AC4
B
195 210Right-handed alpha
Helix 23
AC5
B
212 224Right-handed alpha
Helix 24
AC6
B
231 243Right-handed alpha
Helix 25
AC7
B
244 248Right-handed 310
Helix 26
AC8
B
260 265Right-handed alpha
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There are 2 sheets in PDB entry 6JHA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
33 38parallel
Strand 3
A
9 12parallel
Strand 4
A
89 92parallel
Strand 5
A
140 145parallel
Strand 6
A
183 190parallel
Strand 7
A
254 257parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 64first strand
Strand 2
B
33 38parallel
Strand 3
B
9 12parallel
Strand 4
B
89 92parallel
Strand 5
B
140 145parallel
Strand 6
B
183 190parallel
Strand 7
B
254 257parallel
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