Analysis of interatomic Contacts of Structural Units in PDB entry:
6JHO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JHO entry

There are 4 chains in PDB entry 6JHO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0GLU 199
B
 GLY 0GLU 199
C
 ARG 297ASN 479
D
 ARG 297TYR 478
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 6JHO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 17Right-handed alpha
Helix 2
AA2
A
17 22Right-handed alpha
Helix 3
AA3
A
23 36Right-handed alpha
Helix 4
AA4
A
37 42Right-handed 310
Helix 5
AA5
A
44 62Right-handed alpha
Helix 6
AA6
A
66 95Right-handed alpha
Helix 7
AA7
A
97 129Right-handed alpha
Helix 8
AA8
A
130 131Right-handed 310
Helix 9
AA9
A
132 136Right-handed 310
Helix 10
AB1
A
141 152Right-handed alpha
Helix 11
AB2
A
153 177Right-handed alpha
Helix 12
AB3
A
183 195Right-handed alpha
Helix 13
AB4
B
6 18Right-handed alpha
Helix 14
AB5
B
23 36Right-handed alpha
Helix 15
AB6
B
37 42Right-handed 310
Helix 16
AB7
B
44 62Right-handed alpha
Helix 17
AB8
B
65 95Right-handed alpha
Helix 18
AB9
B
97 129Right-handed alpha
Helix 19
AC1
B
130 131Right-handed 310
Helix 20
AC2
B
132 136Right-handed 310
Helix 21
AC3
B
141 152Right-handed alpha
Helix 22
AC4
B
153 177Right-handed alpha
Helix 23
AC5
B
183 195Right-handed alpha
Helix 24
AC6
C
299 304Right-handed 310
Helix 25
AC7
C
313 320Right-handed alpha
Helix 26
AC8
C
335 348Right-handed alpha
Helix 27
AC9
C
356 379Right-handed alpha
Helix 28
AD1
C
380 391Right-handed alpha
Helix 29
AD2
C
399 406Right-handed alpha
Helix 30
AD3
C
424 429Right-handed alpha
Helix 31
AD4
C
431 435Right-handed 310
Helix 32
AD5
C
437 442Right-handed alpha
Helix 33
AD6
C
444 457Right-handed alpha
Helix 34
AD7
C
463 474Right-handed alpha
Helix 35
AD8
C
475 479Right-handed 310
Helix 36
AD9
D
299 304Right-handed 310
Helix 37
AE1
D
313 320Right-handed alpha
Helix 38
AE2
D
335 348Right-handed alpha
Helix 39
AE3
D
356 379Right-handed alpha
Helix 40
AE4
D
380 391Right-handed alpha
Helix 41
AE5
D
399 406Right-handed alpha
Helix 42
AE6
D
424 429Right-handed alpha
Helix 43
AE7
D
431 435Right-handed 310
Helix 44
AE8
D
437 442Right-handed alpha
Helix 45
AE9
D
444 457Right-handed alpha
Helix 46
AF1
D
463 474Right-handed alpha
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There are 2 sheets in PDB entry 6JHO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
410 413first strand
Strand 2
C
420 423anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
410 413first strand
Strand 2
D
420 423anti-parallel
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