Analysis of interatomic Contacts of Structural Units in PDB entry:
6JHT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JHT entry

There are 5 chains in PDB entry 6JHT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3THR 272
B
 GLU 5SER 220
C
 MET 1GLN 246
D
 ASP 1CYS 213
E
 GLU 1ARG 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6JHT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 63Right-handed 310
Helix 2
AA2
A
84 88Right-handed 310
Helix 3
AA3
A
124 131Right-handed alpha
Helix 4
AA4
A
178 186Right-handed alpha
Helix 5
AA5
B
52 57Right-handed alpha
Helix 6
AA6
B
82 88Right-handed alpha
Helix 7
AA7
B
94 99Right-handed alpha
Helix 8
AA8
B
140 144Right-handed 310
Helix 9
AA9
C
30 34Right-handed 310
Helix 10
AB1
C
51 56Right-handed alpha
Helix 11
AB2
C
99 106Right-handed alpha
Helix 12
AB3
C
143 147Right-handed 310
Helix 13
AB4
C
150 154Right-handed 310
Helix 14
AB5
C
185 188Right-handed 310
Helix 15
AB6
D
120 126Right-handed alpha
Helix 16
AB7
D
182 186Right-handed alpha
Helix 17
AB8
E
87 91Right-handed 310
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There are 22 sheets in PDB entry 6JHT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 98first strand
Strand 2
A
243 251anti-parallel
Strand 3
A
141 149anti-parallel
Strand 4
A
197 202anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 110first strand
Strand 2
A
228 234anti-parallel
Strand 3
A
154 159anti-parallel
Strand 4
A
187 191anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
134 138anti-parallel
Strand 3
A
256 260anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 18first strand
Strand 2
B
23 26anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 62first strand
Strand 2
B
199 216anti-parallel
Strand 3
B
66 69anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 62first strand
Strand 2
B
199 216anti-parallel
Strand 3
B
101 115anti-parallel
Strand 4
B
156 161anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 80first strand
Strand 2
B
180 191anti-parallel
Strand 3
B
121 130anti-parallel
Strand 4
B
149 150anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 67first strand
Strand 2
C
219 224anti-parallel
Strand 3
C
108 121anti-parallel
Strand 4
C
182 183anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 173first strand
Strand 2
C
108 121anti-parallel
Strand 3
C
227 236anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
75 80first strand
Strand 2
C
200 205anti-parallel
Strand 3
C
130 137anti-parallel
Strand 4
C
159 161anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 6first strand
Strand 2
D
19 25anti-parallel
Strand 3
D
69 74anti-parallel
Strand 4
D
61 64anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 13first strand
Strand 2
D
101 105parallel
Strand 3
D
83 85anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 34first strand
Strand 2
D
87 88anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 48first strand
Strand 2
D
52 53anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
113 117first strand
Strand 2
D
128 138anti-parallel
Strand 3
D
172 181anti-parallel
Strand 4
D
158 159anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
152 153first strand
Strand 2
D
147 149anti-parallel
Strand 3
D
190 194anti-parallel
Strand 4
D
205 209anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
6 7first strand
Strand 2
E
17 22anti-parallel
Strand 3
E
78 84anti-parallel
Strand 4
E
69 73anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 11first strand
Strand 2
E
115 118parallel
Strand 3
E
92 101anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
45 51anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 11first strand
Strand 2
E
115 118parallel
Strand 3
E
92 101anti-parallel
Strand 4
E
106 111anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
128 132first strand
Strand 2
E
144 151anti-parallel
Strand 3
E
187 191anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
159 162first strand
Strand 2
E
202 207anti-parallel
Strand 3
E
212 217anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
177 178first strand
Strand 2
E
183 184anti-parallel
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