Analysis of interatomic Contacts of Structural Units in PDB entry:
6JHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JHX entry

There are 2 chains in PDB entry 6JHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1LYS 491
B
 LYS 1ARG 488
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6JHX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 40Right-handed alpha
Helix 2
AA2
A
53 65Right-handed alpha
Helix 3
AA3
A
76 86Right-handed alpha
Helix 4
AA4
A
92 100Right-handed alpha
Helix 5
AA5
A
100 110Right-handed alpha
Helix 6
AA6
A
110 118Right-handed alpha
Helix 7
AA7
A
143 149Right-handed alpha
Helix 8
AA8
A
156 170Right-handed alpha
Helix 9
AA9
A
189 194Right-handed alpha
Helix 10
AB1
A
195 199Right-handed 310
Helix 11
AB2
A
220 223Right-handed 310
Helix 12
AB3
A
224 240Right-handed alpha
Helix 13
AB4
A
246 251Right-handed alpha
Helix 14
AB5
A
253 261Right-handed alpha
Helix 15
AB6
A
271 281Right-handed alpha
Helix 16
AB7
A
325 336Right-handed alpha
Helix 17
AB8
A
338 348Right-handed alpha
Helix 18
AB9
A
364 370Right-handed alpha
Helix 19
AC1
A
373 381Right-handed alpha
Helix 20
AC2
A
392 398Right-handed alpha
Helix 21
AC3
A
401 415Right-handed alpha
Helix 22
AC4
A
427 455Right-handed alpha
Helix 23
AC5
A
458 473Right-handed alpha
Helix 24
AC6
A
474 491Right-handed alpha
Helix 25
AC7
B
29 40Right-handed alpha
Helix 26
AC8
B
53 65Right-handed alpha
Helix 27
AC9
B
76 86Right-handed alpha
Helix 28
AD1
B
92 100Right-handed alpha
Helix 29
AD2
B
100 110Right-handed alpha
Helix 30
AD3
B
110 118Right-handed alpha
Helix 31
AD4
B
143 150Right-handed alpha
Helix 32
AD5
B
156 170Right-handed alpha
Helix 33
AD6
B
189 194Right-handed alpha
Helix 34
AD7
B
195 199Right-handed 310
Helix 35
AD8
B
220 223Right-handed 310
Helix 36
AD9
B
224 240Right-handed alpha
Helix 37
AE1
B
250 252Right-handed 310
Helix 38
AE2
B
253 261Right-handed alpha
Helix 39
AE3
B
271 281Right-handed alpha
Helix 40
AE4
B
325 336Right-handed alpha
Helix 41
AE5
B
338 348Right-handed alpha
Helix 42
AE6
B
364 369Right-handed alpha
Helix 43
AE7
B
373 380Right-handed alpha
Helix 44
AE8
B
392 398Right-handed alpha
Helix 45
AE9
B
401 415Right-handed alpha
Helix 46
AF1
B
427 454Right-handed alpha
Helix 47
AF2
B
458 473Right-handed alpha
Helix 48
AF3
B
474 488Right-handed alpha
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There are 10 sheets in PDB entry 6JHX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
11 19anti-parallel
Strand 3
A
41 45parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
11 19anti-parallel
Strand 3
A
70 73parallel
Strand 4
A
316 319anti-parallel
Strand 5
A
127 130anti-parallel
Strand 6
A
389 390parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
264 270parallel
Strand 3
A
137 142anti-parallel
Strand 4
A
290 293anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
217 219anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 357first strand
Strand 2
A
360 363anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
11 19anti-parallel
Strand 3
B
41 45parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
11 19anti-parallel
Strand 3
B
70 73parallel
Strand 4
B
316 319anti-parallel
Strand 5
B
127 130anti-parallel
Strand 6
B
389 390parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 183first strand
Strand 2
B
264 270parallel
Strand 3
B
137 142anti-parallel
Strand 4
B
290 293anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 214first strand
Strand 2
B
217 219anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 357first strand
Strand 2
B
360 363anti-parallel
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