Analysis of interatomic Contacts of Structural Units in PDB entry:
6JI1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JI1 entry

There are 4 chains in PDB entry 6JI1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 8THR 492
B
 VAL 8THR 492
C
 VAL 8THR 492
D
 VAL 8THR 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are105 helices in PDB entry 6JI1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 32Right-handed alpha
Helix 2
AA2
A
34 42Right-handed alpha
Helix 3
AA3
A
47 72Right-handed alpha
Helix 4
AA4
A
77 85Right-handed alpha
Helix 5
AA5
A
87 95Right-handed alpha
Helix 6
AA6
A
104 119Right-handed alpha
Helix 7
AA7
A
120 129Right-handed alpha
Helix 8
AA8
A
139 159Right-handed alpha
Helix 9
AA9
A
162 169Right-handed alpha
Helix 10
AB1
A
177 198Right-handed alpha
Helix 11
AB2
A
199 200Right-handed 310
Helix 12
AB3
A
201 206Right-handed 310
Helix 13
AB4
A
216 236Right-handed alpha
Helix 14
AB5
A
241 255Right-handed alpha
Helix 15
AB6
A
258 262Right-handed 310
Helix 16
AB7
A
272 292Right-handed alpha
Helix 17
AB8
A
296 302Right-handed alpha
Helix 18
AB9
A
324 327Right-handed 310
Helix 19
AC1
A
328 336Right-handed alpha
Helix 20
AC2
A
358 381Right-handed alpha
Helix 21
AC3
A
390 403Right-handed alpha
Helix 22
AC4
A
424 439Right-handed alpha
Helix 23
AC5
A
440 445Right-handed alpha
Helix 24
AC6
A
446 448Right-handed 310
Helix 25
AC7
A
459 484Right-handed alpha
Helix 26
AC8
A
487 492Right-handed alpha
Helix 27
AC9
B
9 32Right-handed alpha
Helix 28
AD1
B
34 42Right-handed alpha
Helix 29
AD2
B
47 72Right-handed alpha
Helix 30
AD3
B
77 85Right-handed alpha
Helix 31
AD4
B
87 95Right-handed alpha
Helix 32
AD5
B
104 119Right-handed alpha
Helix 33
AD6
B
120 129Right-handed alpha
Helix 34
AD7
B
139 159Right-handed alpha
Helix 35
AD8
B
162 169Right-handed alpha
Helix 36
AD9
B
177 198Right-handed alpha
Helix 37
AE1
B
199 200Right-handed 310
Helix 38
AE2
B
201 206Right-handed 310
Helix 39
AE3
B
216 236Right-handed alpha
Helix 40
AE4
B
241 255Right-handed alpha
Helix 41
AE5
B
258 262Right-handed 310
Helix 42
AE6
B
272 292Right-handed alpha
Helix 43
AE7
B
296 302Right-handed alpha
Helix 44
AE8
B
324 327Right-handed 310
Helix 45
AE9
B
328 336Right-handed alpha
Helix 46
AF1
B
358 381Right-handed alpha
Helix 47
AF2
B
390 403Right-handed alpha
Helix 48
AF3
B
424 439Right-handed alpha
Helix 49
AF4
B
440 445Right-handed alpha
Helix 50
AF5
B
446 448Right-handed 310
Helix 51
AF6
B
459 484Right-handed alpha
Helix 52
AF7
B
487 492Right-handed alpha
Helix 53
AF8
C
9 32Right-handed alpha
Helix 54
AF9
C
34 42Right-handed alpha
Helix 55
AG1
C
47 72Right-handed alpha
Helix 56
AG2
C
77 85Right-handed alpha
Helix 57
AG3
C
87 95Right-handed alpha
Helix 58
AG4
C
104 119Right-handed alpha
Helix 59
AG5
C
120 129Right-handed alpha
Helix 60
AG6
C
139 159Right-handed alpha
Helix 61
AG7
C
162 169Right-handed alpha
Helix 62
AG8
C
177 198Right-handed alpha
Helix 63
AG9
C
199 200Right-handed 310
Helix 64
AH1
C
201 206Right-handed 310
Helix 65
AH2
C
216 236Right-handed alpha
Helix 66
AH3
C
241 255Right-handed alpha
Helix 67
AH4
C
258 262Right-handed 310
Helix 68
AH5
C
272 292Right-handed alpha
Helix 69
AH6
C
296 302Right-handed alpha
Helix 70
AH7
C
324 327Right-handed 310
Helix 71
AH8
C
328 336Right-handed alpha
Helix 72
AH9
C
358 372Right-handed alpha
Helix 73
AI1
C
372 381Right-handed alpha
Helix 74
AI2
C
390 403Right-handed alpha
Helix 75
AI3
C
424 439Right-handed alpha
Helix 76
AI4
C
440 445Right-handed alpha
Helix 77
AI5
C
446 448Right-handed 310
Helix 78
AI6
C
459 484Right-handed alpha
Helix 79
AI7
C
487 492Right-handed alpha
Helix 80
AI8
D
9 32Right-handed alpha
Helix 81
AI9
D
34 42Right-handed alpha
Helix 82
AJ1
D
47 72Right-handed alpha
Helix 83
AJ2
D
77 85Right-handed alpha
Helix 84
AJ3
D
87 95Right-handed alpha
Helix 85
AJ4
D
104 119Right-handed alpha
Helix 86
AJ5
D
120 129Right-handed alpha
Helix 87
AJ6
D
139 159Right-handed alpha
Helix 88
AJ7
D
162 169Right-handed alpha
Helix 89
AJ8
D
177 198Right-handed alpha
Helix 90
AJ9
D
199 200Right-handed 310
Helix 91
AK1
D
201 206Right-handed 310
Helix 92
AK2
D
216 236Right-handed alpha
Helix 93
AK3
D
241 255Right-handed alpha
Helix 94
AK4
D
258 262Right-handed 310
Helix 95
AK5
D
272 292Right-handed alpha
Helix 96
AK6
D
296 302Right-handed alpha
Helix 97
AK7
D
324 327Right-handed 310
Helix 98
AK8
D
328 336Right-handed alpha
Helix 99
AK9
D
358 381Right-handed alpha
Helix 100
AL1
D
390 403Right-handed alpha
Helix 101
AL2
D
424 439Right-handed alpha
Helix 102
AL3
D
440 445Right-handed alpha
Helix 103
AL4
D
446 448Right-handed 310
Helix 104
AL5
D
459 484Right-handed alpha
Helix 105
AL6
D
487 492Right-handed alpha
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There are no sheets in PDB entry 6JI1
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