Analysis of interatomic Contacts of Structural Units in PDB entry:
6JL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JL7 entry

There is 1 chain in PDB entry 6JL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 17THR 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6JL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 28Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
49 58Right-handed alpha
Helix 4
AA4
A
66 71Right-handed alpha
Helix 5
AA5
A
78 94Right-handed alpha
Helix 6
AA6
A
99 118Right-handed alpha
Helix 7
AA7
A
127 139Right-handed alpha
Helix 8
AA8
A
141 156Right-handed alpha
Helix 9
AA9
A
158 162Right-handed 310
Helix 10
AB1
A
165 179Right-handed alpha
Helix 11
AB2
A
179 189Right-handed alpha
Helix 12
AB3
A
192 204Right-handed alpha
Helix 13
AB4
A
210 225Right-handed alpha
Helix 14
AB5
A
228 241Right-handed alpha
Helix 15
AB6
A
241 248Right-handed alpha
Helix 16
AB7
A
252 262Right-handed alpha
Helix 17
AB8
A
263 267Right-handed 310
Helix 18
AB9
A
268 270Right-handed 310
Helix 19
AC1
A
271 285Right-handed alpha
Helix 20
AC2
A
288 293Right-handed alpha
Helix 21
AC3
A
294 298Right-handed 310
Helix 22
AC4
A
321 332Right-handed alpha
Helix 23
AC5
A
345 352Right-handed alpha
Helix 24
AC6
A
363 368Right-handed alpha
Helix 25
AC7
A
368 390Right-handed alpha
Helix 26
AC8
A
410 422Right-handed alpha
Helix 27
AC9
A
432 445Right-handed alpha
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There are 2 sheets in PDB entry 6JL7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 320first strand
Strand 2
A
427 430parallel
Strand 3
A
397 401parallel
Strand 4
A
338 342parallel
Strand 5
A
358 359parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 354first strand
Strand 2
A
457 458anti-parallel
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