Analysis of interatomic Contacts of Structural Units in PDB entry:
6JLH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JLH entry

There are 4 chains in PDB entry 6JLH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 7GLY 267
B
 SER 1GLU 17
C
 GLY 12GLY 267
D
 SER 1GLU 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6JLH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 21Right-handed alpha
Helix 2
AA2
A
30 45Right-handed alpha
Helix 3
AA3
A
51 67Right-handed alpha
Helix 4
AA4
A
75 84Right-handed alpha
Helix 5
AA5
A
85 95Right-handed 310
Helix 6
AA6
A
102 114Right-handed alpha
Helix 7
AA7
A
122 137Right-handed alpha
Helix 8
AA8
A
142 158Right-handed alpha
Helix 9
AA9
A
166 174Right-handed alpha
Helix 10
AB1
A
179 184Right-handed 310
Helix 11
AB2
A
190 206Right-handed alpha
Helix 12
AB3
A
215 227Right-handed alpha
Helix 13
AB4
A
234 250Right-handed alpha
Helix 14
AB5
A
259 267Right-handed alpha
Helix 15
AB6
B
2 17Right-handed alpha
Helix 16
AB7
C
13 21Right-handed alpha
Helix 17
AB8
C
30 45Right-handed alpha
Helix 18
AB9
C
51 67Right-handed alpha
Helix 19
AC1
C
75 84Right-handed alpha
Helix 20
AC2
C
87 93Right-handed alpha
Helix 21
AC3
C
102 114Right-handed alpha
Helix 22
AC4
C
122 137Right-handed alpha
Helix 23
AC5
C
142 158Right-handed alpha
Helix 24
AC6
C
166 174Right-handed alpha
Helix 25
AC7
C
180 184Right-handed 310
Helix 26
AC8
C
190 206Right-handed alpha
Helix 27
AC9
C
215 227Right-handed alpha
Helix 28
AD1
C
234 250Right-handed alpha
Helix 29
AD2
C
259 267Right-handed alpha
Helix 30
AD3
D
2 15Right-handed alpha
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There are 2 sheets in PDB entry 6JLH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 213first strand
Strand 2
A
257 258anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
212 213first strand
Strand 2
C
257 258anti-parallel
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