Analysis of interatomic Contacts of Structural Units in PDB entry:
6JLS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JLS entry

There is 1 chain in PDB entry 6JLS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 12GLU 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6JLS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 27Right-handed 310
Helix 2
AA2
A
28 38Right-handed alpha
Helix 3
AA3
A
50 55Right-handed 310
Helix 4
AA4
A
57 62Right-handed alpha
Helix 5
AA5
A
63 65Right-handed 310
Helix 6
AA6
A
71 79Right-handed alpha
Helix 7
AA7
A
81 89Right-handed alpha
Helix 8
AA8
A
99 108Right-handed alpha
Helix 9
AA9
A
113 122Right-handed alpha
Helix 10
AB1
A
133 138Right-handed alpha
Helix 11
AB2
A
139 152Right-handed alpha
Helix 12
AB3
A
179 191Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6JLS.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
43 48parallel
Strand 3
A
15 20parallel
Strand 4
A
92 98parallel
Strand 5
A
126 130parallel
Strand 6
A
155 156parallel
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