Analysis of interatomic Contacts of Structural Units in PDB entry:
6JRP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JRP entry

There are 12 chains in PDB entry 6JRP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 199LYS 272
B
 A 1 A 11
C
 T 1 T 11
D
 HIS 199LYS 272
E
 A 1 A 11
F
 T 1 T 11
G
 HIS 199LYS 272
H
 A 1 A 11
I
 T 1 T 11
J
 HIS 199LYS 272
K
 A 1 A 11
L
 T 1 T 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6JRP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
205 222Right-handed alpha
Helix 2
AA2
A
226 240Right-handed alpha
Helix 3
AA3
A
242 264Right-handed alpha
Helix 4
AA4
D
205 222Right-handed alpha
Helix 5
AA5
D
228 240Right-handed alpha
Helix 6
AA6
D
242 259Right-handed alpha
Helix 7
AA7
D
259 264Right-handed alpha
Helix 8
AA8
G
205 222Right-handed alpha
Helix 9
AA9
G
226 240Right-handed alpha
Helix 10
AB1
G
242 259Right-handed alpha
Helix 11
AB2
J
205 222Right-handed alpha
Helix 12
AB3
J
228 240Right-handed alpha
Helix 13
AB4
J
242 259Right-handed alpha
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There are no sheets in PDB entry 6JRP
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