Analysis of interatomic Contacts of Structural Units in PDB entry:
6JTB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JTB entry

There is 1 chain in PDB entry 6JTB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 22PRO 720
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6JTB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 29Right-handed 310
Helix 2
AA2
A
30 41Right-handed alpha
Helix 3
AA3
A
46 51Right-handed alpha
Helix 4
AA4
A
57 60Right-handed 310
Helix 5
AA5
A
83 94Right-handed alpha
Helix 6
AA6
A
100 105Right-handed alpha
Helix 7
AA7
A
110 114Right-handed 310
Helix 8
AA8
A
131 140Right-handed alpha
Helix 9
AA9
A
148 151Right-handed 310
Helix 10
AB1
A
152 165Right-handed alpha
Helix 11
AB2
A
167 172Right-handed alpha
Helix 12
AB3
A
183 186Right-handed 310
Helix 13
AB4
A
206 211Right-handed alpha
Helix 14
AB5
A
284 294Right-handed alpha
Helix 15
AB6
A
294 317Right-handed alpha
Helix 16
AB7
A
317 348Right-handed alpha
Helix 17
AB8
A
349 368Right-handed alpha
Helix 18
AB9
A
371 401Right-handed alpha
Helix 19
AC1
A
405 410Right-handed 310
Helix 20
AC2
A
414 421Right-handed alpha
Helix 21
AC3
A
425 444Right-handed alpha
Helix 22
AC4
A
449 468Right-handed alpha
Helix 23
AC5
A
469 473Right-handed 310
Helix 24
AC6
A
474 477Right-handed 310
Helix 25
AC7
A
478 485Right-handed alpha
Helix 26
AC8
A
487 499Right-handed alpha
Helix 27
AC9
A
503 513Right-handed alpha
Helix 28
AD1
A
515 521Right-handed alpha
Helix 29
AD2
A
522 543Right-handed alpha
Helix 30
AD3
A
545 565Right-handed alpha
Helix 31
AD4
A
601 608Right-handed alpha
Helix 32
AD5
A
612 616Right-handed 310
Helix 33
AD6
A
618 628Right-handed alpha
Helix 34
AD7
A
675 682Right-handed 310
Helix 35
AD8
A
696 706Right-handed alpha
Helix 36
AD9
A
709 716Right-handed alpha
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There are 5 sheets in PDB entry 6JTB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
229 235anti-parallel
Strand 4
A
79 82anti-parallel
Strand 5
A
69 73anti-parallel
Strand 6
A
62 65anti-parallel
Strand 7
A
122 130anti-parallel
Strand 8
A
187 196anti-parallel
Strand 9
A
175 182anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
229 235anti-parallel
Strand 4
A
249 250anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
718 719parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 583first strand
Strand 2
A
269 274anti-parallel
Strand 3
A
658 660anti-parallel
Strand 4
A
666 673anti-parallel
Strand 5
A
691 695anti-parallel
Strand 6
A
641 646anti-parallel
Strand 7
A
598 600anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
587 590first strand
Strand 2
A
593 595anti-parallel
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