Analysis of interatomic Contacts of Structural Units in PDB entry:
6JTG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JTG entry

There is 1 chain in PDB entry 6JTG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1GLN 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6JTG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 13Right-handed alpha
Helix 2
AA2
A
38 48Right-handed alpha
Helix 3
AA3
A
90 109Right-handed alpha
Helix 4
AA4
A
151 165Right-handed alpha
Helix 5
AA5
A
180 184Right-handed 310
Helix 6
AA6
A
186 194Right-handed alpha
Helix 7
AA7
A
206 214Right-handed alpha
Helix 8
AA8
A
216 225Right-handed alpha
Helix 9
AA9
A
249 263Right-handed alpha
Helix 10
AB1
A
264 269Right-handed alpha
Helix 11
AB2
A
278 298Right-handed alpha
Helix 12
AB3
A
298 312Right-handed alpha
Helix 13
AB4
A
334 347Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6JTG.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
76 79anti-parallel
Strand 3
A
120 126anti-parallel
Strand 4
A
65 71parallel
Strand 5
A
132 136anti-parallel
Strand 6
A
29 33parallel
Strand 7
A
170 176parallel
Strand 8
A
200 205parallel
Strand 9
A
235 238parallel
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