Analysis of interatomic Contacts of Structural Units in PDB entry:
6JTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JTZ entry

There are 2 chains in PDB entry 6JTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 282LYS 592
B
 ASN 282LYS 592
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6JTZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
296 309Right-handed alpha
Helix 2
AA2
A
323 336Right-handed alpha
Helix 3
AA3
A
349 362Right-handed alpha
Helix 4
AA4
A
394 402Right-handed alpha
Helix 5
AA5
A
403 405Right-handed 310
Helix 6
AA6
A
421 431Right-handed alpha
Helix 7
AA7
A
435 449Right-handed alpha
Helix 8
AA8
A
453 463Right-handed alpha
Helix 9
AA9
A
489 506Right-handed alpha
Helix 10
AB1
A
511 520Right-handed alpha
Helix 11
AB2
A
524 528Right-handed 310
Helix 12
AB3
A
538 552Right-handed alpha
Helix 13
AB4
A
575 581Right-handed 310
Helix 14
AB5
B
296 310Right-handed alpha
Helix 15
AB6
B
323 337Right-handed alpha
Helix 16
AB7
B
349 362Right-handed alpha
Helix 17
AB8
B
394 403Right-handed alpha
Helix 18
AB9
B
421 431Right-handed alpha
Helix 19
AC1
B
435 449Right-handed alpha
Helix 20
AC2
B
453 463Right-handed alpha
Helix 21
AC3
B
489 506Right-handed alpha
Helix 22
AC4
B
511 520Right-handed alpha
Helix 23
AC5
B
524 528Right-handed 310
Helix 24
AC6
B
538 552Right-handed alpha
Helix 25
AC7
B
574 581Right-handed 310
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There are 6 sheets in PDB entry 6JTZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 292first strand
Strand 2
A
412 418parallel
Strand 3
A
385 388parallel
Strand 4
A
317 320parallel
Strand 5
A
367 370parallel
Strand 6
A
341 344parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 488first strand
Strand 2
A
587 591anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 559first strand
Strand 2
A
568 572anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
286 292first strand
Strand 2
B
412 418parallel
Strand 3
B
385 388parallel
Strand 4
B
317 320parallel
Strand 5
B
367 370parallel
Strand 6
B
341 344parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
484 488first strand
Strand 2
B
587 591anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
555 559first strand
Strand 2
B
568 572anti-parallel
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