Analysis of interatomic Contacts of Structural Units in PDB entry:
6JU6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JU6 entry

There are 2 chains in PDB entry 6JU6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1GLY 453
B
 GLY 0GLN 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6JU6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 31Right-handed alpha
Helix 2
AA2
A
36 52Right-handed alpha
Helix 3
AA3
A
59 68Right-handed alpha
Helix 4
AA4
A
98 126Right-handed alpha
Helix 5
AA5
A
127 129Right-handed 310
Helix 6
AA6
A
130 141Right-handed alpha
Helix 7
AA7
A
168 172Right-handed 310
Helix 8
AA8
A
201 205Right-handed 310
Helix 9
AA9
A
226 230Right-handed 310
Helix 10
AB1
A
243 248Right-handed alpha
Helix 11
AB2
A
253 264Right-handed alpha
Helix 12
AB3
A
278 289Right-handed alpha
Helix 13
AB4
A
293 299Right-handed alpha
Helix 14
AB5
A
303 308Right-handed 310
Helix 15
AB6
A
323 337Right-handed alpha
Helix 16
AB7
A
344 351Right-handed 310
Helix 17
AB8
A
355 358Right-handed 310
Helix 18
AB9
A
361 365Right-handed 310
Helix 19
AC1
A
366 386Right-handed alpha
Helix 20
AC2
A
395 400Right-handed 310
Helix 21
AC3
A
423 426Right-handed 310
Helix 22
AC4
A
427 432Right-handed 310
Helix 23
AC5
A
435 439Right-handed 310
Helix 24
AC6
A
443 453Right-handed alpha
Helix 25
AC7
B
21 30Right-handed alpha
Helix 26
AC8
B
36 52Right-handed alpha
Helix 27
AC9
B
59 66Right-handed alpha
Helix 28
AD1
B
98 126Right-handed alpha
Helix 29
AD2
B
127 129Right-handed 310
Helix 30
AD3
B
130 141Right-handed alpha
Helix 31
AD4
B
168 172Right-handed 310
Helix 32
AD5
B
201 205Right-handed 310
Helix 33
AD6
B
226 230Right-handed 310
Helix 34
AD7
B
243 248Right-handed alpha
Helix 35
AD8
B
253 264Right-handed alpha
Helix 36
AD9
B
278 289Right-handed alpha
Helix 37
AE1
B
293 299Right-handed alpha
Helix 38
AE2
B
300 303Right-handed 310
Helix 39
AE3
B
323 337Right-handed alpha
Helix 40
AE4
B
344 351Right-handed 310
Helix 41
AE5
B
355 358Right-handed 310
Helix 42
AE6
B
361 365Right-handed 310
Helix 43
AE7
B
366 386Right-handed alpha
Helix 44
AE8
B
395 400Right-handed 310
Helix 45
AE9
B
421 426Right-handed 310
Helix 46
AF1
B
427 432Right-handed 310
Helix 47
AF2
B
436 440Right-handed alpha
Helix 48
AF3
B
443 453Right-handed alpha
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There are 10 sheets in PDB entry 6JU6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
88 89anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 178first strand
Strand 2
A
186 190anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 218first strand
Strand 2
A
221 225anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 339first strand
Strand 2
A
352 353anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 410first strand
Strand 2
A
417 421anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
434 435parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 178first strand
Strand 2
B
186 190anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 218first strand
Strand 2
B
221 225anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
338 339first strand
Strand 2
B
352 353anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
408 409first strand
Strand 2
B
418 419anti-parallel
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