Analysis of interatomic Contacts of Structural Units in PDB entry:
6JWK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6JWK entry

There are 2 chains in PDB entry 6JWK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 212
B
 MET 1LEU 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6JWK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 23Right-handed alpha
Helix 2
AA2
A
65 77Right-handed alpha
Helix 3
AA3
A
86 104Right-handed alpha
Helix 4
AA4
A
104 109Right-handed alpha
Helix 5
AA5
A
109 119Right-handed alpha
Helix 6
AA6
A
123 150Right-handed alpha
Helix 7
AA7
A
161 177Right-handed alpha
Helix 8
AA8
A
184 196Right-handed alpha
Helix 9
AA9
A
197 204Right-handed alpha
Helix 10
AB1
A
205 208Right-handed 310
Helix 11
AB2
B
9 23Right-handed alpha
Helix 12
AB3
B
24 26Right-handed 310
Helix 13
AB4
B
65 77Right-handed alpha
Helix 14
AB5
B
86 104Right-handed alpha
Helix 15
AB6
B
104 109Right-handed alpha
Helix 16
AB7
B
109 121Right-handed alpha
Helix 17
AB8
B
123 150Right-handed alpha
Helix 18
AB9
B
161 177Right-handed alpha
Helix 19
AC1
B
184 196Right-handed alpha
Helix 20
AC2
B
197 204Right-handed alpha
Helix 21
AC3
B
205 208Right-handed 310
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There are 2 sheets in PDB entry 6JWK. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
2 4parallel
Strand 3
A
54 56anti-parallel
Strand 4
A
62 63anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 30first strand
Strand 2
B
2 5parallel
Strand 3
B
54 56anti-parallel
Strand 4
B
62 63anti-parallel
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