Analysis of interatomic Contacts of Structural Units in PDB entry:
6JX7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6JX7 entry

There are 3 chains in PDB entry 6JX7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 62	SER 1337
B	TYR 62	SER 1337
C	TYR 62	SER 1337

There are 72 helices in PDB entry 6JX7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	77	Right-handed alpha
Helix 2	AA2	A	503	513	Right-handed alpha
Helix 3	AA3	A	562	566	Right-handed 310
Helix 4	AA4	A	567	574	Right-handed alpha
Helix 5	AA5	A	630	634	Right-handed 310
Helix 6	AA6	A	888	894	Right-handed alpha
Helix 7	AA7	A	897	902	Right-handed alpha
Helix 8	AA8	A	903	906	Right-handed 310
Helix 9	AA9	A	907	930	Right-handed alpha
Helix 10	AB1	A	936	941	Right-handed alpha
Helix 11	AB2	A	962	970	Right-handed alpha
Helix 12	AB3	A	978	985	Right-handed alpha
Helix 13	AB4	A	1011	1019	Right-handed alpha
Helix 14	AB5	A	1029	1046	Right-handed alpha
Helix 15	AB6	A	1056	1067	Right-handed alpha
Helix 16	AB7	A	1075	1099	Right-handed alpha
Helix 17	AB8	A	1109	1125	Right-handed alpha
Helix 18	AB9	A	1127	1137	Right-handed alpha
Helix 19	AC1	A	1138	1140	Right-handed 310
Helix 20	AC2	A	1149	1154	Right-handed alpha
Helix 21	AC3	A	1158	1205	Right-handed alpha
Helix 22	AC4	A	1292	1294	Right-handed 310
Helix 23	AC5	A	1310	1318	Right-handed alpha
Helix 24	AC6	A	1323	1336	Right-handed alpha
Helix 25	AC7	B	65	77	Right-handed alpha
Helix 26	AC8	B	503	513	Right-handed alpha
Helix 27	AC9	B	562	566	Right-handed 310
Helix 28	AD1	B	567	574	Right-handed alpha
Helix 29	AD2	B	630	634	Right-handed 310
Helix 30	AD3	B	888	894	Right-handed alpha
Helix 31	AD4	B	897	902	Right-handed alpha
Helix 32	AD5	B	903	906	Right-handed 310
Helix 33	AD6	B	907	930	Right-handed alpha
Helix 34	AD7	B	936	941	Right-handed alpha
Helix 35	AD8	B	962	970	Right-handed alpha
Helix 36	AD9	B	978	985	Right-handed alpha
Helix 37	AE1	B	1011	1019	Right-handed alpha
Helix 38	AE2	B	1029	1046	Right-handed alpha
Helix 39	AE3	B	1056	1067	Right-handed alpha
Helix 40	AE4	B	1075	1099	Right-handed alpha
Helix 41	AE5	B	1109	1125	Right-handed alpha
Helix 42	AE6	B	1127	1137	Right-handed alpha
Helix 43	AE7	B	1138	1140	Right-handed 310
Helix 44	AE8	B	1149	1154	Right-handed alpha
Helix 45	AE9	B	1158	1205	Right-handed alpha
Helix 46	AF1	B	1292	1294	Right-handed 310
Helix 47	AF2	B	1310	1318	Right-handed alpha
Helix 48	AF3	B	1323	1336	Right-handed alpha
Helix 49	AF4	C	65	77	Right-handed alpha
Helix 50	AF5	C	503	513	Right-handed alpha
Helix 51	AF6	C	562	566	Right-handed 310
Helix 52	AF7	C	567	574	Right-handed alpha
Helix 53	AF8	C	630	634	Right-handed 310
Helix 54	AF9	C	888	894	Right-handed alpha
Helix 55	AG1	C	897	902	Right-handed alpha
Helix 56	AG2	C	903	906	Right-handed 310
Helix 57	AG3	C	907	930	Right-handed alpha
Helix 58	AG4	C	936	941	Right-handed alpha
Helix 59	AG5	C	962	970	Right-handed alpha
Helix 60	AG6	C	978	985	Right-handed alpha
Helix 61	AG7	C	1011	1019	Right-handed alpha
Helix 62	AG8	C	1029	1046	Right-handed alpha
Helix 63	AG9	C	1056	1067	Right-handed alpha
Helix 64	AH1	C	1075	1099	Right-handed alpha
Helix 65	AH2	C	1109	1125	Right-handed alpha
Helix 66	AH3	C	1127	1137	Right-handed alpha
Helix 67	AH4	C	1138	1140	Right-handed 310
Helix 68	AH5	C	1149	1154	Right-handed alpha
Helix 69	AH6	C	1158	1205	Right-handed alpha
Helix 70	AH7	C	1292	1294	Right-handed 310
Helix 71	AH8	C	1310	1318	Right-handed alpha
Helix 72	AH9	C	1323	1336	Right-handed alpha

There are 54 sheets in PDB entry 6JX7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	108	first strand
Strand 2	A	224	228	anti-parallel
Strand 3	A	123	128	anti-parallel
Strand 4	A	137	143	anti-parallel
Strand 5	A	149	155	anti-parallel
Strand 6	A	178	185	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	216	first strand
Strand 2	A	205	207	anti-parallel
Strand 3	A	196	200	anti-parallel
Strand 4	A	114	117	anti-parallel
Strand 5	A	240	242	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	324	first strand
Strand 2	A	478	491	anti-parallel
Strand 3	A	351	352	anti-parallel
Strand 4	A	439	442	anti-parallel
Strand 5	A	447	449	anti-parallel
Strand 6	A	452	455	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	324	first strand
Strand 2	A	478	491	anti-parallel
Strand 3	A	495	500	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	337	first strand
Strand 2	A	460	465	anti-parallel
Strand 3	A	373	377	anti-parallel
Strand 4	A	382	384	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	386	387	first strand
Strand 2	A	413	417	anti-parallel
Strand 3	A	427	432	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	524	first strand
Strand 2	A	757	761	anti-parallel
Strand 3	A	766	771	anti-parallel
Strand 4	A	807	809	anti-parallel
Strand 5	A	800	802	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	537	first strand
Strand 2	A	702	707	parallel
Strand 3	A	710	718	anti-parallel
Strand 4	A	747	751	anti-parallel
Strand 5	A	736	740	anti-parallel
Strand 6	A	728	730	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	588	591	first strand
Strand 2	A	577	582	anti-parallel
Strand 3	A	548	554	anti-parallel
Strand 4	A	603	609	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	600	601	first strand
Strand 2	A	671	683	parallel
Strand 3	A	654	659	anti-parallel
Strand 4	A	621	624	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	600	601	first strand
Strand 2	A	671	683	parallel
Strand 3	A	639	645	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	829	831	first strand
Strand 2	A	837	839	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	843	844	first strand
Strand 2	C	934	935	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	862	864	first strand
Strand 2	A	1247	1249	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	869	878	first strand
Strand 2	A	1232	1242	anti-parallel
Strand 3	A	1221	1229	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	885	887	first strand
Strand 2	A	1021	1023	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	934	935	first strand
Strand 2	B	843	844	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1296	1299	first strand
Strand 2	A	1260	1264	anti-parallel
Strand 3	A	1254	1256	anti-parallel
Strand 4	A	1307	1309	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1269	1273	first strand
Strand 2	A	1278	1282	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	108	first strand
Strand 2	B	224	228	anti-parallel
Strand 3	B	123	128	anti-parallel
Strand 4	B	137	143	anti-parallel
Strand 5	B	149	155	anti-parallel
Strand 6	B	178	185	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	216	first strand
Strand 2	B	205	207	anti-parallel
Strand 3	B	196	200	anti-parallel
Strand 4	B	114	117	anti-parallel
Strand 5	B	240	242	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	324	first strand
Strand 2	B	478	491	anti-parallel
Strand 3	B	351	352	anti-parallel
Strand 4	B	439	442	anti-parallel
Strand 5	B	447	449	anti-parallel
Strand 6	B	452	455	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	324	first strand
Strand 2	B	478	491	anti-parallel
Strand 3	B	495	500	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	337	first strand
Strand 2	B	460	465	anti-parallel
Strand 3	B	373	377	anti-parallel
Strand 4	B	382	384	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	386	387	first strand
Strand 2	B	413	417	anti-parallel
Strand 3	B	427	432	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	524	first strand
Strand 2	B	757	761	anti-parallel
Strand 3	B	766	771	anti-parallel
Strand 4	B	807	809	anti-parallel
Strand 5	B	800	802	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	537	first strand
Strand 2	B	702	707	parallel
Strand 3	B	710	718	anti-parallel
Strand 4	B	747	751	anti-parallel
Strand 5	B	736	740	anti-parallel
Strand 6	B	728	730	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	588	591	first strand
Strand 2	B	577	582	anti-parallel
Strand 3	B	548	554	anti-parallel
Strand 4	B	603	609	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	600	601	first strand
Strand 2	B	671	683	parallel
Strand 3	B	654	659	anti-parallel
Strand 4	B	621	624	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	600	601	first strand
Strand 2	B	671	683	parallel
Strand 3	B	639	645	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	829	831	first strand
Strand 2	B	837	839	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	862	864	first strand
Strand 2	B	1247	1249	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	869	878	first strand
Strand 2	B	1232	1242	anti-parallel
Strand 3	B	1221	1229	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	885	887	first strand
Strand 2	B	1021	1023	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	934	935	first strand
Strand 2	C	843	844	parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1296	1299	first strand
Strand 2	B	1260	1264	anti-parallel
Strand 3	B	1254	1256	anti-parallel
Strand 4	B	1307	1309	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1269	1273	first strand
Strand 2	B	1278	1282	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	108	first strand
Strand 2	C	224	228	anti-parallel
Strand 3	C	123	128	anti-parallel
Strand 4	C	137	143	anti-parallel
Strand 5	C	149	155	anti-parallel
Strand 6	C	178	185	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	216	first strand
Strand 2	C	205	207	anti-parallel
Strand 3	C	196	200	anti-parallel
Strand 4	C	114	117	anti-parallel
Strand 5	C	240	242	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	324	first strand
Strand 2	C	478	491	anti-parallel
Strand 3	C	351	352	anti-parallel
Strand 4	C	439	442	anti-parallel
Strand 5	C	447	449	anti-parallel
Strand 6	C	452	455	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	324	first strand
Strand 2	C	478	491	anti-parallel
Strand 3	C	495	500	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	334	337	first strand
Strand 2	C	460	465	anti-parallel
Strand 3	C	373	377	anti-parallel
Strand 4	C	382	384	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	386	387	first strand
Strand 2	C	413	417	anti-parallel
Strand 3	C	427	432	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	520	524	first strand
Strand 2	C	757	761	anti-parallel
Strand 3	C	766	771	anti-parallel
Strand 4	C	807	809	anti-parallel
Strand 5	C	800	802	anti-parallel

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There are 6 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	537	first strand
Strand 2	C	702	707	parallel
Strand 3	C	710	718	anti-parallel
Strand 4	C	747	751	anti-parallel
Strand 5	C	736	740	anti-parallel
Strand 6	C	728	730	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	588	591	first strand
Strand 2	C	577	582	anti-parallel
Strand 3	C	548	554	anti-parallel
Strand 4	C	603	609	parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	600	601	first strand
Strand 2	C	671	683	parallel
Strand 3	C	654	659	anti-parallel
Strand 4	C	621	624	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	600	601	first strand
Strand 2	C	671	683	parallel
Strand 3	C	639	645	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	829	831	first strand
Strand 2	C	837	839	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	862	864	first strand
Strand 2	C	1247	1249	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	869	878	first strand
Strand 2	C	1232	1242	anti-parallel
Strand 3	C	1221	1229	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	885	887	first strand
Strand 2	C	1021	1023	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1296	1299	first strand
Strand 2	C	1260	1264	anti-parallel
Strand 3	C	1254	1256	anti-parallel
Strand 4	C	1307	1309	parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1269	1273	first strand
Strand 2	C	1278	1282	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6JX7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6JX7